FFCP PHASE1:Hg19::chr20:57571799..57571828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:57571799..57571828,+ | |||
|coexpression_cluster_id=C632 | |coexpression_cluster_id=C632 | ||
|description=CAGE_peak_at_chr20:57571799..57571828,+ | |description=CAGE_peak_at_chr20:57571799..57571828,+ | ||
|id=chr20:57571799..57571828,+ | |id=chr20:57571799..57571828,+ | ||
|ontology_enrichment_celltype=CL:0000235;4.68e-34;6!CL:0002619;2.55e-17;3!CL:0000473;2.65e-10;39!CL:0000234;2.65e-10;39!CL:0000840;3.31e-09;5!CL:0000135;4.71e-08;3!CL:0000388;4.71e-08;3 | |ontology_enrichment_celltype=CL:0002009!6.82e-09!65;CL:0002194!8.81e-09!63;CL:0000576!8.81e-09!63;CL:0000040!8.81e-09!63;CL:0000559!8.81e-09!63;CL:0000839!4.07e-07!70;CL:0000557!4.97e-07!71 | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;4.68e-34;6!CL:0002619;2.55e-17;3!CL:0000473;2.65e-10;39!CL:0000234;2.65e-10;39!CL:0000840;3.31e-09;5!CL:0000135;4.71e-08;3!CL:0000388;4.71e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.55e-34,6;CL:0002194,2.50e-20,59;CL:0000576,2.50e-20,59;CL:0000040,2.50e-20,59;CL:0000559,2.50e-20,59;CL:0002009,1.47e-19,61;CL:0000839,7.72e-18,66;CL:0000557,1.59e-17,67;CL:0002619,2.50e-17,3;CL:0000766,4.37e-16,72;CL:0000473,9.46e-10,48;CL:0000234,9.46e-10,48;CL:0000763,1.22e-09,108;CL:0000049,1.22e-09,108;CL:0000840,3.14e-09,5;CL:0001029,3.14e-09,5;CL:0002087,7.38e-09,115;CL:0000135,2.28e-08,3;CL:0000388,2.28e-08,3;CL:0002031,2.35e-08,120;CL:0000738,5.35e-07,136;CL:0000511,6.99e-07,1;CL:0002625,6.99e-07,1;CL:0000216,6.99e-07,1;CL:0002581,7.82e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007846;4.71e-08;3!UBERON:0000043;4.71e-08;3!UBERON:0007845;4.71e-08;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.71e-08;3!UBERON:0000043;4.71e-08;3!UBERON:0007845;4.71e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.54e-15,76;UBERON:0001474,9.92e-14,82;UBERON:0002405,2.12e-13,93;UBERON:0002193,1.54e-12,108;UBERON:0002390,1.67e-12,98;UBERON:0003061,1.67e-12,98;UBERON:0004765,3.21e-12,90;UBERON:0001434,3.38e-12,100;UBERON:0002204,6.30e-10,167;UBERON:0007846,2.28e-08,3;UBERON:0000043,2.28e-08,3;UBERON:0007845,2.28e-08,3;UBERON:0003081,2.04e-07,203;UBERON:0001136,6.99e-07,1;UBERON:0001343,6.99e-07,1;UBERON:0004910,6.99e-07,1;UBERON:0005154,6.99e-07,1;UBERON:0005295,6.99e-07,1;UBERON:0004813,6.99e-07,1;UBERON:0005297,6.99e-07,1;UBERON:0005294,6.99e-07,1;UBERON:0010141,6.99e-07,1;UBERON:0005891,6.99e-07,1;UBERON:0002079,8.27e-07,1 | |||
|phase1_expression=0.363356758541113,0,0,2.00146596706261,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0,0,0,0.142169232487422,0,0,0.200544447470142,0.651032612147555,2.01523926815932,2.26725566213286,1.28787783817093,0,0,0.242584061187816,0,0,0,1.1507695692886,0,0,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0,0.612167784741805,0,0,0.659702600373432,0.598390972864896,0.852449501065388,0.580418477257168,0,0.622822248995575,1.00499466102697,1.0429658368404,0.868755378820466,0,0.368277635987565,0,0.633765858935825,0.850417199860174,0.209658645508376,0.22465726229299,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0.443458794925128,0.351339142772504,0.261958150995425,0,0,7.14004266040303,2.96020553408754,6.38198210490553,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0.835979866147242,0,0,0.33472061276467,0.402829317109147,0,0.488124115096339,0,2.43042584364528,0,0.44905874525234,0,0,0,0.549605231791222,0,0,0,0.496971951695318,0,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.901428353439581,0.340296549480063,0,0.427114777637135,0.211931901159562,0.300091096084402,0,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.276149695926898,0,1.06502877754984,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.828147600278907,0.168584690078102,0.241011029883482,0.441175890929576,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0,0,0,0,2.94017422771084,1.26755034821831,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0.433099343283221,0.925971025153221,1.33177906564219,0,0,6.64785916435973,1.63802985597466,7.13429578985896,0,0.16798212819886,0.425325291727159,0.53735113621709,0,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0.600686115687835,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.977208552881205,0,0,0,0,0.499864955910285,7.29742683847143,9.5428847372104,10.5416969741516,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.03985430765404,0.356857977594324,0,0.35142424497814,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0.213455115606889,0,0,0.907170879989041,0,0,0.280660094433074,0.128139149255701,1.02341449813341,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0.581051892299796,0.241718899183244,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0.447749509444357,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.471249609382746,0,0,0,0,1.21856744815642,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0,1.26664581178598,0.329294892959902,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0.254253650292766,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0,0.569710279235006,0,0,0.217294743844016,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,0,0,0.146178634172371,0.164230914106418,0,0,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0.39961921916426,0,0,0,0,0.248505071130865,0.235694034616795,0.271808412147228,0.2092056926246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| ||
|short_description=p@chr20:57571799..57571828,+ | |short_description=p@chr20:57571799..57571828,+ | ||
}} | }} |
Latest revision as of 15:52, 28 July 2015
Short description: | p@chr20:57571799..57571828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:57571799..57571828, + |
Coexpression cluster: | C632_Monocytederived_Macrophage_Dendritic_CD14_Keratinocyte_basal_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.55e-34 | 6 |
monopoietic cell | 2.50e-20 | 59 |
monocyte | 2.50e-20 | 59 |
monoblast | 2.50e-20 | 59 |
promonocyte | 2.50e-20 | 59 |
macrophage dendritic cell progenitor | 1.47e-19 | 61 |
myeloid lineage restricted progenitor cell | 7.72e-18 | 66 |
granulocyte monocyte progenitor cell | 1.59e-17 | 67 |
adult endothelial progenitor cell | 2.50e-17 | 3 |
myeloid leukocyte | 4.37e-16 | 72 |
defensive cell | 9.46e-10 | 48 |
phagocyte | 9.46e-10 | 48 |
myeloid cell | 1.22e-09 | 108 |
common myeloid progenitor | 1.22e-09 | 108 |
immature conventional dendritic cell | 3.14e-09 | 5 |
common dendritic progenitor | 3.14e-09 | 5 |
nongranular leukocyte | 7.38e-09 | 115 |
fibrocyte | 2.28e-08 | 3 |
tendon cell | 2.28e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 2.35e-08 | 120 |
leukocyte | 5.35e-07 | 136 |
androgen binding protein secreting cell | 6.99e-07 | 1 |
seminiferous tubule epithelial cell | 6.99e-07 | 1 |
Sertoli cell | 6.99e-07 | 1 |
perirenal preadipocyte | 7.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.54e-15 | 76 |
bone element | 9.92e-14 | 82 |
immune system | 2.12e-13 | 93 |
hemolymphoid system | 1.54e-12 | 108 |
hematopoietic system | 1.67e-12 | 98 |
blood island | 1.67e-12 | 98 |
skeletal element | 3.21e-12 | 90 |
skeletal system | 3.38e-12 | 100 |
musculoskeletal system | 6.30e-10 | 167 |
dense regular connective tissue | 2.28e-08 | 3 |
tendon | 2.28e-08 | 3 |
regular connective tissue | 2.28e-08 | 3 |
lateral plate mesoderm | 2.04e-07 | 203 |
mesothelium | 6.99e-07 | 1 |
seminiferous tubule of testis | 6.99e-07 | 1 |
epithelium of male gonad | 6.99e-07 | 1 |
epithelial cord | 6.99e-07 | 1 |
sex cord | 6.99e-07 | 1 |
seminiferous tubule epithelium | 6.99e-07 | 1 |
testis sex cord | 6.99e-07 | 1 |
genital ridge | 6.99e-07 | 1 |
primitive sex cord of indifferent gonad | 6.99e-07 | 1 |
coelomic epithelium | 6.99e-07 | 1 |
left cardiac atrium | 8.27e-07 | 1 |