FFCP PHASE1:Hg19::chr20:57197900..57197919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:57197900..57197919,+ | |||
|description=CAGE_peak_at_chr20:57197900..57197919,+ | |description=CAGE_peak_at_chr20:57197900..57197919,+ | ||
|id=chr20:57197900..57197919,+ | |id=chr20:57197900..57197919,+ | ||
|ontology_enrichment_celltype=CL:0000062!8.92e-19!11;CL:0000375!8.92e-19!11;CL:0000335!8.92e-19!11;CL:0000035!1.78e-09!20;CL:0000128!4.95e-09!7;CL:0000126!4.95e-09!7;CL:0000127!4.95e-09!7;CL:0002453!4.95e-09!7;CL:0002092!5.73e-09!10;CL:0000243!9.18e-09!15;CL:0000125!9.18e-09!15;CL:0000030!9.18e-09!15;CL:0000339!9.18e-09!15;CL:0002603!2.20e-08!3;CL:0000095!1.09e-07!17;CL:0000123!1.09e-07!17;CL:0000055!3.78e-07!180;CL:0002540!4.60e-07!6 | |ontology_enrichment_celltype=CL:0000062!8.92e-19!11;CL:0000375!8.92e-19!11;CL:0000335!8.92e-19!11;CL:0000035!1.78e-09!20;CL:0000128!4.95e-09!7;CL:0000126!4.95e-09!7;CL:0000127!4.95e-09!7;CL:0002453!4.95e-09!7;CL:0002092!5.73e-09!10;CL:0000243!9.18e-09!15;CL:0000125!9.18e-09!15;CL:0000030!9.18e-09!15;CL:0000339!9.18e-09!15;CL:0002603!2.20e-08!3;CL:0000095!1.09e-07!17;CL:0000123!1.09e-07!17;CL:0000055!3.78e-07!180;CL:0002540!4.60e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.16e-16;9!CL:0000222;3.00e-10;1!CL:0002568;3.00e-10;1!CL:0002379;3.00e-10;1!CL:0002149;3.14e-07;6!CL:0002255;3.14e-07;6!CL:0000138;4.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.28e-20,11;CL:0000375,1.28e-20,11;CL:0000335,1.28e-20,11;CL:0002568,1.89e-10,1;CL:0002379,2.08e-10,1;CL:0002149,3.04e-07,6;CL:0002255,3.04e-07,6;CL:0000058,4.13e-07,6;CL:0000138,4.13e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000335;1.02e-20;11!UBERON:0000358;1.65e-10;1 | |||
|ontology_enrichment_disease=DOID:2394!6.08e-11!14;DOID:120!4.01e-08!27;DOID:3093!7.40e-08!11;DOID:193!2.03e-07!29 | |ontology_enrichment_disease=DOID:2394!6.08e-11!14;DOID:120!4.01e-08!27;DOID:3093!7.40e-08!11;DOID:193!2.03e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:3347;1.08e-10;1!DOID:3620;3.00e-10;1!DOID:3565;3.00e-10;1!DOID:3001;3.14e-07;6!DOID:201;5.42e-07;6!DOID:0060100;5.42e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.08e-10,1;DOID:3620,2.08e-10,1;DOID:3565,2.08e-10,1;DOID:3001,3.04e-07,6;DOID:201,5.26e-07,6;DOID:0060100,5.26e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000349!3.53e-09!5;UBERON:0000992!5.13e-09!13;UBERON:0002118!8.30e-09!5;UBERON:0004532!8.30e-09!5 | |ontology_enrichment_uberon=UBERON:0000349!3.53e-09!5;UBERON:0000992!5.13e-09!13;UBERON:0002118!8.30e-09!5;UBERON:0004532!8.30e-09!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5670016293577,3.89307896242109,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.93907573636667,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,6.64225598535437,5.34670588770939,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0.160853921143607,0,0.154209693802656,0.710246901252508,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0.222617410045812,0.329607748453519,0,0,0,0,0.920418142519393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32971271899477,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.815425236441684,0.941425616810999,0,4.33425884852278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0.597019211547496,0.233713309847224,0,0.378806010550178,0,0,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0.465788870628778,0.414706207840855,1.86089200190596,0,0,0,0.813741466409323,0.545545977607678,0.859284456339908,0,0.398095888698616,0,0,1.34699795506368,1.26184898228651,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,5.52287940848081,0,0,10.488663572583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857440047187092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5470171125869,6.68877257284203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr20:57197900..57197919,+ | |short_description=p@chr20:57197900..57197919,+ | ||
}} | }} |
Latest revision as of 15:47, 28 July 2015
Short description: | p@chr20:57197900..57197919, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:57197900..57197919, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.28e-20 | 11 |
osteoprogenitor cell | 1.28e-20 | 11 |
mesenchyme condensation cell | 1.28e-20 | 11 |
mesenchymal stem cell of Wharton's jelly | 1.89e-10 | 1 |
meningothelial cell | 2.08e-10 | 1 |
epithelial cell of uterus | 3.04e-07 | 6 |
stromal cell of endometrium | 3.04e-07 | 6 |
chondroblast | 4.13e-07 | 6 |
chondrocyte | 4.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.08e-10 | 1 |
central nervous system cancer | 2.08e-10 | 1 |
meningioma | 2.08e-10 | 1 |
female reproductive endometrioid cancer | 3.04e-07 | 6 |
connective tissue cancer | 5.26e-07 | 6 |
musculoskeletal system cancer | 5.26e-07 | 6 |