FFCP PHASE1:Hg19::chr20:48884002..48884088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000425497,ENST00000445003,uc010zyr.1_5end | |association_with_transcript=0bp_to_ENST00000425497,ENST00000445003,uc010zyr.1_5end | ||
|cluster_id=chr20:48884002..48884088,+ | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_1_at_ENST00000425497_5end,CAGE_peak_1_at_ENST00000445003_5end,CAGE_peak_1_at_uc010zyr.1_5end | |description=CAGE_peak_1_at_ENST00000425497_5end,CAGE_peak_1_at_ENST00000445003_5end,CAGE_peak_1_at_uc010zyr.1_5end | ||
|id=chr20:48884002..48884088,+ | |id=chr20:48884002..48884088,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.96e-35!63;CL:0000576!2.96e-35!63;CL:0000040!2.96e-35!63;CL:0000559!2.96e-35!63;CL:0002009!2.74e-33!65;CL:0002057!2.62e-30!42;CL:0000860!3.30e-30!45;CL:0000839!1.09e-29!70;CL:0000766!6.36e-29!76;CL:0000557!7.08e-29!71;CL:0000763!4.79e-15!112;CL:0000049!4.79e-15!112;CL:0002087!2.11e-11!119;CL:0000738!1.99e-09!140;CL:0002031!1.09e-08!124;CL:0000134!6.86e-08!358;CL:0000219!1.80e-07!390;CL:0002393!2.86e-07!9;CL:0002397!2.86e-07!9;CL:0002320!3.28e-07!365 | |ontology_enrichment_celltype=CL:0002194!2.96e-35!63;CL:0000576!2.96e-35!63;CL:0000040!2.96e-35!63;CL:0000559!2.96e-35!63;CL:0002009!2.74e-33!65;CL:0002057!2.62e-30!42;CL:0000860!3.30e-30!45;CL:0000839!1.09e-29!70;CL:0000766!6.36e-29!76;CL:0000557!7.08e-29!71;CL:0000763!4.79e-15!112;CL:0000049!4.79e-15!112;CL:0002087!2.11e-11!119;CL:0000738!1.99e-09!140;CL:0002031!1.09e-08!124;CL:0000134!6.86e-08!358;CL:0000219!1.80e-07!390;CL:0002393!2.86e-07!9;CL:0002397!2.86e-07!9;CL:0002320!3.28e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.64e-36;39!CL:0000234;2.64e-36;39!CL:0000860;1.50e-34;33!CL:0002057;1.50e-34;33!CL:0000576;1.33e-30;48!CL:0000766;2.40e-21;69!CL:0000235;2.45e-10;6!CL:0000763;8.86e-09;100!CL:0002393;2.23e-07;6!CL:0002397;2.23e-07;6!CL:0000148;2.60e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.59e-57,59;CL:0000576,3.59e-57,59;CL:0000040,3.59e-57,59;CL:0000559,3.59e-57,59;CL:0000473,8.03e-57,48;CL:0000234,8.03e-57,48;CL:0002009,1.12e-54,61;CL:0000839,4.23e-49,66;CL:0000557,4.38e-48,67;CL:0000860,8.84e-48,42;CL:0002057,8.84e-48,42;CL:0000766,2.47e-47,72;CL:0000763,3.11e-25,108;CL:0000049,3.11e-25,108;CL:0002087,1.68e-22,115;CL:0002031,6.84e-19,120;CL:0000738,4.10e-18,136;CL:0000037,1.87e-11,168;CL:0002032,2.36e-11,161;CL:0000837,2.36e-11,161;CL:0002393,4.43e-11,9;CL:0002397,4.43e-11,9;CL:0000235,2.47e-10,6;CL:0000988,4.44e-10,177;CL:0000219,1.74e-07,386;CL:0000148,2.60e-07,10;CL:0000541,2.60e-07,10;CL:0000134,5.91e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.13e-35;42!CL:0000049;1.10e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.68e-27!80;UBERON:0002390!1.73e-26!102;UBERON:0003061!1.73e-26!102;UBERON:0001474!2.46e-26!86;UBERON:0004765!3.36e-26!101;UBERON:0001434!3.36e-26!101;UBERON:0002193!3.78e-23!112;UBERON:0002405!2.59e-20!115;UBERON:0000062!9.42e-14!511;UBERON:0000926!3.94e-13!448;UBERON:0004120!3.94e-13!448;UBERON:0006603!3.94e-13!448;UBERON:0002204!4.00e-13!167;UBERON:0000467!1.05e-10!625;UBERON:0000480!1.45e-10!626;UBERON:0000468!2.11e-09!659;UBERON:0002050!1.30e-07!605;UBERON:0005423!1.30e-07!605;UBERON:0000923!1.89e-07!604;UBERON:0005291!1.89e-07!604;UBERON:0006598!1.89e-07!604;UBERON:0002532!1.89e-07!604;UBERON:0000922!3.73e-07!612;UBERON:0003081!4.88e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.98e-45,76;UBERON:0002390,1.84e-41,98;UBERON:0003061,1.84e-41,98;UBERON:0001474,1.14e-40,82;UBERON:0002405,4.43e-39,93;UBERON:0002193,4.45e-37,108;UBERON:0004765,2.53e-35,90;UBERON:0001434,1.38e-33,100;UBERON:0002204,2.50e-18,167;UBERON:0003081,8.03e-17,203;UBERON:0000926,2.10e-14,315;UBERON:0004120,2.10e-14,315;UBERON:0006603,2.10e-14,315;UBERON:0000923,7.44e-07,560;UBERON:0010316,7.44e-07,560;UBERON:0005291,7.44e-07,560;UBERON:0006598,7.44e-07,560;UBERON:0010317,7.44e-07,560;UBERON:0002532,7.44e-07,560 | |||
|phase1_expression=0.54503513781167,3.63970890614671,0.704772020479856,2.00146596706261,0.893922188854576,0,2.53299878168311,3.15859936713415,3.13422753839806,0,0.697801167972428,0,0,0.123766352960047,0,5.3786011716142,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,0.767658796194425,3.09632246632152,0,0,0,0,0,0,2.21598163412751,2.20598892217156,1.95309783644267,283.029159439264,272.394573121962,167.681694529855,14.2490274003973,21.1610528465733,5.57943340731977,20.6861842846059,41.9391245782262,26.0153351551887,13.2338500468189,13.5765174460423,7.33094912654614,8.96338769915208,20.6555098746824,9.47985406160392,25.224473498709,39.8442979084455,14.1575795200403,8.26426509401437,17.6510964891852,8.31138263538754,8.90598510504134,14.7603106640008,3.83602275479425,9.28669563611469,13.0498601678962,7.4738669879469,20.0998932205395,22.9452484104889,8.68755378820467,4.84319602106695,11.0483290796269,2.84816148696796,9.92899845666126,4.03948169933583,8.17668717482666,1.57260083605093,0.600707571366025,1.76798145366788,17.3857773682162,10.3436672143527,13.8824756861122,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,7.33482822787191,0,0,54.5239621339868,50.149364342189,106.100452494054,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,2.4826786753885,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,1.87296046098192,1.71141546463335,2.54062756938062,0.23486899728753,0,0.140450806702248,0.816616685019573,0.245668634623536,1.03325781175765,1.18800285728205,1.97813543422845,0,0,0.673344455816265,0.125118519871964,1.38532057742091,0.877955241761676,1.22595118319608,3.45547535485173,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.736399189138395,0.161646056818812,0,0.403008392910561,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,6.25798129319264,0.643240938192885,2.76269842704961,0.928735856063958,2.16563844500876,0.828147600278907,0.674338760312407,0.241011029883482,0.661763836394364,0.653638332277218,0.949082476444386,0.674156540800822,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,294.967973292702,356.388495807059,182.964960777424,0,0,0.141775097242386,0.179117045405697,0,1.15014803749563,0,0,0,0,0.12624243342638,87.8175878060698,91.2952337084284,85.5687364633343,54.7431827272657,22.8277033801378,25.2288168588891,51.4487578735041,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,306.4919272158,373.17701893407,259.325745564129,0,0,0,0,1.43833425785268,0.537182889719687,0,0.197030760201927,0,0,0,0,0,1.67516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,2.0694614258501,0,0,0.521301686808497,0,0,2.68798433959754,3.01999881146064,0.960548020230999,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0.492762936082855,0,0.464841513839837,0,1.00253235151642,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,1.30151357865721,16.1774388286924,0.366277859273374,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0,0.681813019328807,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31510213706675,0,0,3.717881977197,0,0,0,0,0,0.844430541190656,0.658589785919804,0,1.04980416073495,0,0,0,15.2512957258382,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,1.19115887728894,0.411362273086194,0,1.62009431171434,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0.626719583092093,0,0,0,0,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,35.1619630252546,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.622079175323615,0.539210106883961,0.895105873378046,0,2.76201535783414,0,0,0,0.0927680981618513,0,0,0,3.62499787717397,0.227586896570999,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.557694977114413,1.38510465306835,2.16489906109302,0,0,0,1.5950057986596,3.93869651628008,7.99552164027952,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,1.85760885457012,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.978323094660449,0,0.789168805698781,0,0,4.80218005176509,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.391969589657511,0,1.7472666824203,0,0.387025325156341,0.219267951258557,0.246346371159628,1.26085721434945,0,1.58186518546373,0,0,0,0,7.29445264288957,0.85381197895741,0,0.432271251462318,0,0,0,0,1.17847017308398,0,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,5.74298419661451,0.599037001496973,0.429226048136571,2.23171457441873,0.268733889946905,0,0,0.0787831823072236,0.164831716762333,0.134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| |phase1_expression=0.54503513781167,3.63970890614671,0.704772020479856,2.00146596706261,0.893922188854576,0,2.53299878168311,3.15859936713415,3.13422753839806,0,0.697801167972428,0,0,0.123766352960047,0,5.3786011716142,0,0,0,0,0,0,0,0,0,0,0,0,6.68719270643137,0.767658796194425,3.09632246632152,0,0,0,0,0,0,2.21598163412751,2.20598892217156,1.95309783644267,283.029159439264,272.394573121962,167.681694529855,14.2490274003973,21.1610528465733,5.57943340731977,20.6861842846059,41.9391245782262,26.0153351551887,13.2338500468189,13.5765174460423,7.33094912654614,8.96338769915208,20.6555098746824,9.47985406160392,25.224473498709,39.8442979084455,14.1575795200403,8.26426509401437,17.6510964891852,8.31138263538754,8.90598510504134,14.7603106640008,3.83602275479425,9.28669563611469,13.0498601678962,7.4738669879469,20.0998932205395,22.9452484104889,8.68755378820467,4.84319602106695,11.0483290796269,2.84816148696796,9.92899845666126,4.03948169933583,8.17668717482666,1.57260083605093,0.600707571366025,1.76798145366788,17.3857773682162,10.3436672143527,13.8824756861122,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0,0,0,0.434539556882471,0,0,0,0,0.087834785693126,7.33482822787191,0,0,54.5239621339868,50.149364342189,106.100452494054,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,2.4826786753885,0,0,0,0.622422070799533,0.134710672069688,0,0,0,0,1.87296046098192,1.71141546463335,2.54062756938062,0.23486899728753,0,0.140450806702248,0.816616685019573,0.245668634623536,1.03325781175765,1.18800285728205,1.97813543422845,0,0,0.673344455816265,0.125118519871964,1.38532057742091,0.877955241761676,1.22595118319608,3.45547535485173,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.736399189138395,0.161646056818812,0,0.403008392910561,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,6.25798129319264,0.643240938192885,2.76269842704961,0.928735856063958,2.16563844500876,0.828147600278907,0.674338760312407,0.241011029883482,0.661763836394364,0.653638332277218,0.949082476444386,0.674156540800822,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,294.967973292702,356.388495807059,182.964960777424,0,0,0.141775097242386,0.179117045405697,0,1.15014803749563,0,0,0,0,0.12624243342638,87.8175878060698,91.2952337084284,85.5687364633343,54.7431827272657,22.8277033801378,25.2288168588891,51.4487578735041,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,306.4919272158,373.17701893407,259.325745564129,0,0,0,0,1.43833425785268,0.537182889719687,0,0.197030760201927,0,0,0,0,0,1.67516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,2.0694614258501,0,0,0.521301686808497,0,0,2.68798433959754,3.01999881146064,0.960548020230999,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0.492762936082855,0,0.464841513839837,0,1.00253235151642,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.328014645699706,1.30151357865721,16.1774388286924,0.366277859273374,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0,0.681813019328807,0,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31510213706675,0,0,3.717881977197,0,0,0,0,0,0.844430541190656,0.658589785919804,0,1.04980416073495,0,0,0,15.2512957258382,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,1.19115887728894,0.411362273086194,0,1.62009431171434,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0.626719583092093,0,0,0,0,0,0,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0,35.1619630252546,0,0,0,0,0.296964680832639,0,0,0,0,0,0,1.9924798825107,0.276283915531148,0,0,0,0.622079175323615,0.539210106883961,0.895105873378046,0,2.76201535783414,0,0,0,0.0927680981618513,0,0,0,3.62499787717397,0.227586896570999,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.557694977114413,1.38510465306835,2.16489906109302,0,0,0,1.5950057986596,3.93869651628008,7.99552164027952,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,1.85760885457012,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.978323094660449,0,0.789168805698781,0,0,4.80218005176509,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0.391969589657511,0,1.7472666824203,0,0.387025325156341,0.219267951258557,0.246346371159628,1.26085721434945,0,1.58186518546373,0,0,0,0,7.29445264288957,0.85381197895741,0,0.432271251462318,0,0,0,0,1.17847017308398,0,0.209205692624666,0.101998217636322,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,5.74298419661451,0.599037001496973,0.429226048136571,2.23171457441873,0.268733889946905,0,0,0.0787831823072236,0.164831716762333,0.134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| ||
|short_description=p1@ENST00000425497,p1@ENST00000445003,p1@uc010zyr.1 | |short_description=p1@ENST00000425497,p1@ENST00000445003,p1@uc010zyr.1 | ||
}} | }} |
Latest revision as of 15:11, 28 July 2015
Short description: | p1@ENST00000425497, p1@ENST00000445003, p1@uc010zyr.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425497_5end, CAGE_peak_1_at_ENST00000445003_5end, CAGE_peak_1_at_uc010zyr.1_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000425497, ENST00000445003, uc010zyr.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.59e-57 | 59 |
monocyte | 3.59e-57 | 59 |
monoblast | 3.59e-57 | 59 |
promonocyte | 3.59e-57 | 59 |
defensive cell | 8.03e-57 | 48 |
phagocyte | 8.03e-57 | 48 |
macrophage dendritic cell progenitor | 1.12e-54 | 61 |
myeloid lineage restricted progenitor cell | 4.23e-49 | 66 |
granulocyte monocyte progenitor cell | 4.38e-48 | 67 |
classical monocyte | 8.84e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.84e-48 | 42 |
myeloid leukocyte | 2.47e-47 | 72 |
myeloid cell | 3.11e-25 | 108 |
common myeloid progenitor | 3.11e-25 | 108 |
nongranular leukocyte | 1.68e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 6.84e-19 | 120 |
leukocyte | 4.10e-18 | 136 |
hematopoietic stem cell | 1.87e-11 | 168 |
hematopoietic oligopotent progenitor cell | 2.36e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-11 | 161 |
intermediate monocyte | 4.43e-11 | 9 |
CD14-positive, CD16-positive monocyte | 4.43e-11 | 9 |
macrophage | 2.47e-10 | 6 |
hematopoietic cell | 4.44e-10 | 177 |
motile cell | 1.74e-07 | 386 |
melanocyte | 2.60e-07 | 10 |
melanoblast | 2.60e-07 | 10 |
mesenchymal cell | 5.91e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.98e-45 | 76 |
hematopoietic system | 1.84e-41 | 98 |
blood island | 1.84e-41 | 98 |
bone element | 1.14e-40 | 82 |
immune system | 4.43e-39 | 93 |
hemolymphoid system | 4.45e-37 | 108 |
skeletal element | 2.53e-35 | 90 |
skeletal system | 1.38e-33 | 100 |
musculoskeletal system | 2.50e-18 | 167 |
lateral plate mesoderm | 8.03e-17 | 203 |
mesoderm | 2.10e-14 | 315 |
mesoderm-derived structure | 2.10e-14 | 315 |
presumptive mesoderm | 2.10e-14 | 315 |
germ layer | 7.44e-07 | 560 |
germ layer / neural crest | 7.44e-07 | 560 |
embryonic tissue | 7.44e-07 | 560 |
presumptive structure | 7.44e-07 | 560 |
germ layer / neural crest derived structure | 7.44e-07 | 560 |
epiblast (generic) | 7.44e-07 | 560 |