FFCP PHASE1:Hg19::chr20:45947470..45947488,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:45947470..45947488,- to FFCP PHASE1:Hg19::chr20:45947470..45947488,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:45947470..45947488,- | |||
|description=CAGE_peak_at_chr20:45947470..45947488,- | |||
|id=chr20:45947470..45947488,- | |||
|ontology_enrichment_celltype=CL:0000136!7.47e-12!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.15e-26;13!CL:0002615;1.36e-09;3!CL:0002195;3.37e-07;2!CL:0002571;3.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.50e-22,15;CL:0002615,1.01e-09,3;CL:0002195,3.49e-07,2;CL:0002571,3.49e-07,2;CL:0002600,6.51e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.91e-26!115;UBERON:0000475!1.76e-16!365;UBERON:0003075!5.97e-15!86;UBERON:0007284!5.97e-15!86;UBERON:0002616!1.21e-14!59;UBERON:0001049!3.72e-14!57;UBERON:0005068!3.72e-14!57;UBERON:0006241!3.72e-14!57;UBERON:0007135!3.72e-14!57;UBERON:0000477!3.81e-14!286;UBERON:0000483!8.07e-14!309;UBERON:0000119!9.47e-14!312;UBERON:0000468!1.24e-13!659;UBERON:0002346!1.77e-13!90;UBERON:0005743!4.47e-13!86;UBERON:0001017!6.83e-13!82;UBERON:0000481!1.62e-12!347;UBERON:0004121!5.95e-12!169;UBERON:0000153!6.64e-12!129;UBERON:0007811!6.64e-12!129;UBERON:0000467!1.12e-11!625;UBERON:0000480!1.48e-11!626;UBERON:0000033!2.15e-11!123;UBERON:0000924!4.01e-11!173;UBERON:0006601!4.01e-11!173;UBERON:0000955!6.59e-11!69;UBERON:0006238!6.59e-11!69;UBERON:0004111!1.88e-10!241;UBERON:0000073!2.72e-10!94;UBERON:0001016!2.72e-10!94;UBERON:0000025!5.29e-10!194;UBERON:0003080!1.47e-09!42;UBERON:0003056!2.45e-09!61;UBERON:0002780!5.85e-09!41;UBERON:0001890!5.85e-09!41;UBERON:0006240!5.85e-09!41;UBERON:0000922!9.55e-09!612;UBERON:0000923!1.58e-08!604;UBERON:0005291!1.58e-08!604;UBERON:0006598!1.58e-08!604;UBERON:0002532!1.58e-08!604;UBERON:0002050!2.01e-08!605;UBERON:0005423!2.01e-08!605;UBERON:0002020!2.38e-08!34;UBERON:0003528!2.38e-08!34;UBERON:0001893!2.85e-08!34;UBERON:0000064!6.46e-08!219;UBERON:0002791!7.24e-08!33;UBERON:0002298!2.60e-07!8;UBERON:0001869!4.21e-07!32;UBERON:0000479!6.75e-07!787;UBERON:0002308!7.12e-07!9;UBERON:0000125!7.12e-07!9;UBERON:0000062!9.19e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.48e-10,114;UBERON:0009569,1.53e-07,112;UBERON:0005406,8.22e-07,2;UBERON:0003126,9.15e-07,7;UBERON:0001005,9.15e-07,7 | |||
|phase1_expression=1.81678379270557,1.49870366723688,1.9733616573436,2.00146596706261,4.02264984984559,2.61701557230111,2.53299878168311,0.631719873426831,0.783556884599516,0,0.697801167972428,0.655324116390517,0.527533956456907,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,1.22400414746552,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.639312809217652,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0,0,0,1.70843440283719,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,1.22492502752936,0.122834317311768,1.03325781175765,0,0,1.82032272387605,0.718618141816238,0.505008341862199,0.125118519871964,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,4.14404764057442,0.928735856063958,2.88751792667834,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,2.07986957055916,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0,0,0,21.4593867511129,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,3.0025378668211,1.62786481617433,0.823240336780769,0,2.48774364119782,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,1.2328579353023,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,17.5904221197258,0,1.65932251687533,0.173767228936166,0,2.05886054286514,0,0,0,0.606255142892519,0,4.23346410661552,0.744323423456331,0.460385919864187,0,0.768834895534206,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.340906509664404,0,0.165284915360978,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.762520775695299,1.27948895655667,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,2.31510213706675,1.9676842561399,0.202910376962704,0,0.563391205064483,0.430234056612155,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0,0,0.670302275535787,1.08890984861323,0.847294206991012,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.110579259931225,0.886642856860642,0.87754158861589,0,0,0.769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0,0,0,0,1.34802265961354,2.40773294189637,1.1713222286267,0,0.19566461893209,0,0,0,0,3.85438135733777,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0.0730893170861856,0,0.0969890164884194,0,1.58186518546373,0,0,0.379864775735272,0,0,3.62870091056899,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,1.95497680890578,1.14580212005842,0,0.599037001496973,1.28767814440971,0.446342914883745,0.806201669840715,0,0,0,0,0,0,0,0,0.953423842781029,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0.364497339948148,0,0.551639951094387,0.419636705079985,0,0,0.191915197319445,0,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.775697738169303,1.19009341568421,0,0,0.961086713109252,1.10043013569766,7.45630299624952,0.496166021811951,0,0,0,3.80812462358632,5.2644877744767,8.27133057261346,7.86894313703531,0,0,0.366078794705889,0.625954653532499,1.72022758707021,0.665574309221114,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.27707087245721,2.2562800066483,0.252071696221718,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.472763092328763,0.781078098613847,0.620060389503552,1.33173201407204,0,2.19303106742873,1.48863353516788,0,0,0.535701835878287,0,0,0.682986574053893,0.0887023701626388,0,0,0.747667062745149,0.789273282754189,0,0,0,0.942693539496011,0,0,0,0,1.50100742770978,0,0,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.926089897295336,0,0,0.490296643507811,0,0.785233868459781,0.891139200981258,0,0,0.469919589899268,1.09578409555081,0,0,0,0.0802413666891683,5.11235471772562,0,1.29005624836306,0,0.611923411718232,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0.26721740526556,0.275684698604535,0.50141507858475,0,0,0,0.930896962757057,0.639701945702943,0.23806443146374,0.0645889098360061,0.186224142887574,0.112131862580613,0.318235791390825,0.808468755832877,0.435433495793923,0.342233301085281,0.202056159043763,0.215166616178029,2.99394320891412,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=1.81678379270557,1.49870366723688,1.9733616573436,2.00146596706261,4.02264984984559,2.61701557230111,2.53299878168311,0.631719873426831,0.783556884599516,0,0.697801167972428,0.655324116390517,0.527533956456907,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,1.22400414746552,0,0,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0.639312809217652,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0,0,0,1.70843440283719,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,1.22492502752936,0.122834317311768,1.03325781175765,0,0,1.82032272387605,0.718618141816238,0.505008341862199,0.125118519871964,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,4.14404764057442,0.928735856063958,2.88751792667834,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,2.07986957055916,0,0.115930404975077,0.234817388471643,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.336393253036082,0,0,0,21.4593867511129,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,3.0025378668211,1.62786481617433,0.823240336780769,0,2.48774364119782,0,0.301439377059586,0,0,0,0,0,0,0,0,0.289562613335158,1.2328579353023,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,17.5904221197258,0,1.65932251687533,0.173767228936166,0,2.05886054286514,0,0,0,0.606255142892519,0,4.23346410661552,0.744323423456331,0.460385919864187,0,0.768834895534206,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0.340187410553031,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0.721287081534056,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.340906509664404,0,0.165284915360978,0,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.762520775695299,1.27948895655667,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,2.31510213706675,1.9676842561399,0.202910376962704,0,0.563391205064483,0.430234056612155,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0,0,0.670302275535787,1.08890984861323,0.847294206991012,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.110579259931225,0.886642856860642,0.87754158861589,0,0,0.769502585037971,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0,0,0,0,1.34802265961354,2.40773294189637,1.1713222286267,0,0.19566461893209,0,0,0,0,3.85438135733777,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0.0730893170861856,0,0.0969890164884194,0,1.58186518546373,0,0,0.379864775735272,0,0,3.62870091056899,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,1.95497680890578,1.14580212005842,0,0.599037001496973,1.28767814440971,0.446342914883745,0.806201669840715,0,0,0,0,0,0,0,0,0.953423842781029,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0.364497339948148,0,0.551639951094387,0.419636705079985,0,0,0.191915197319445,0,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.775697738169303,1.19009341568421,0,0,0.961086713109252,1.10043013569766,7.45630299624952,0.496166021811951,0,0,0,3.80812462358632,5.2644877744767,8.27133057261346,7.86894313703531,0,0,0.366078794705889,0.625954653532499,1.72022758707021,0.665574309221114,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,1.27707087245721,2.2562800066483,0.252071696221718,0.760729777106397,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0.472763092328763,0.781078098613847,0.620060389503552,1.33173201407204,0,2.19303106742873,1.48863353516788,0,0,0.535701835878287,0,0,0.682986574053893,0.0887023701626388,0,0,0.747667062745149,0.789273282754189,0,0,0,0.942693539496011,0,0,0,0,1.50100742770978,0,0,0,0,0,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.926089897295336,0,0,0.490296643507811,0,0.785233868459781,0.891139200981258,0,0,0.469919589899268,1.09578409555081,0,0,0,0.0802413666891683,5.11235471772562,0,1.29005624836306,0,0.611923411718232,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0.26721740526556,0.275684698604535,0.50141507858475,0,0,0,0.930896962757057,0.639701945702943,0.23806443146374,0.0645889098360061,0.186224142887574,0.112131862580613,0.318235791390825,0.808468755832877,0.435433495793923,0.342233301085281,0.202056159043763,0.215166616178029,2.99394320891412,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p@chr20:45947470..45947488,- | |||
}} | }} |
Latest revision as of 14:44, 28 July 2015
Short description: | p@chr20:45947470..45947488, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:45947470..45947488, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.50e-22 | 15 |
adipocyte of omentum tissue | 1.01e-09 | 3 |
hepatic stem cell | 3.49e-07 | 2 |
hepatic mesenchymal stem cell | 3.49e-07 | 2 |
smooth muscle cell of trachea | 6.51e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.48e-10 | 114 |
subdivision of trunk | 1.53e-07 | 112 |
perirenal fat | 8.22e-07 | 2 |
trachea | 9.15e-07 | 7 |
respiratory airway | 9.15e-07 | 7 |