FFCP PHASE1:Hg19::chr20:44641138..44641146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44641138..44641146,+ | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr20:44641138..44641146,+ | |description=CAGE_peak_at_chr20:44641138..44641146,+ | ||
|id=chr20:44641138..44641146,+ | |id=chr20:44641138..44641146,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.27e-26!76;CL:0000235!1.17e-25!10;CL:0002009!3.78e-24!65;CL:0000775!6.21e-22!3;CL:0000557!7.11e-22!71;CL:0002194!8.60e-22!63;CL:0000576!8.60e-22!63;CL:0000040!8.60e-22!63;CL:0000559!8.60e-22!63;CL:0000839!2.35e-19!70;CL:0000763!8.46e-19!112;CL:0000049!8.46e-19!112;CL:0000738!2.53e-14!140;CL:0002032!1.33e-11!165;CL:0000837!1.33e-11!165;CL:0002031!2.89e-11!124;CL:0000037!5.55e-11!172;CL:0000566!5.55e-11!172;CL:0002087!2.95e-10!119;CL:0000988!3.53e-10!182;CL:0002057!2.12e-09!42;CL:0000860!1.06e-08!45;CL:0000094!1.50e-08!8 | |ontology_enrichment_celltype=CL:0000766!4.27e-26!76;CL:0000235!1.17e-25!10;CL:0002009!3.78e-24!65;CL:0000775!6.21e-22!3;CL:0000557!7.11e-22!71;CL:0002194!8.60e-22!63;CL:0000576!8.60e-22!63;CL:0000040!8.60e-22!63;CL:0000559!8.60e-22!63;CL:0000839!2.35e-19!70;CL:0000763!8.46e-19!112;CL:0000049!8.46e-19!112;CL:0000738!2.53e-14!140;CL:0002032!1.33e-11!165;CL:0000837!1.33e-11!165;CL:0002031!2.89e-11!124;CL:0000037!5.55e-11!172;CL:0000566!5.55e-11!172;CL:0002087!2.95e-10!119;CL:0000988!3.53e-10!182;CL:0002057!2.12e-09!42;CL:0000860!1.06e-08!45;CL:0000094!1.50e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000235;7.95e-147;6!CL:0000473;1.88e-26;39!CL:0000234;1.88e-26;39!CL:0000766;3.34e-10;69!CL:0000775;1.10e-09;3!CL:0000763;6.57e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.01e-147,6;CL:0000473,3.35e-25,48;CL:0000234,3.35e-25,48;CL:0000766,1.13e-21,72;CL:0002194,3.41e-20,59;CL:0000576,3.41e-20,59;CL:0000040,3.41e-20,59;CL:0000559,3.41e-20,59;CL:0002009,1.51e-19,61;CL:0000839,4.26e-18,66;CL:0000557,7.82e-18,67;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000738,1.45e-11,136;CL:0002087,1.81e-10,115;CL:0002031,4.92e-10,120;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000775,1.10e-09,3;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.29e-19!80;UBERON:0001474!1.47e-17!86;UBERON:0002193!1.69e-16!112;UBERON:0002390!2.59e-16!102;UBERON:0003061!2.59e-16!102;UBERON:0002405!5.58e-16!115;UBERON:0004765!1.63e-14!101;UBERON:0001434!1.63e-14!101;UBERON:0002372!5.43e-08!1;UBERON:0001961!5.43e-08!1;UBERON:0001744!5.43e-08!1;UBERON:0001735!5.43e-08!1;UBERON:0002204!1.38e-07!167;UBERON:0003081!6.31e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.27e-16,76;UBERON:0001474,1.26e-14,82;UBERON:0004765,2.41e-13,90;UBERON:0002405,6.42e-13,93;UBERON:0002390,2.88e-12,98;UBERON:0003061,2.88e-12,98;UBERON:0001434,5.03e-12,100;UBERON:0002193,3.84e-11,108;UBERON:0002204,3.35e-07,167 | |||
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|short_description=p@chr20:44641138..44641146,+ | |short_description=p@chr20:44641138..44641146,+ | ||
}} | }} |
Latest revision as of 14:38, 28 July 2015
Short description: | p@chr20:44641138..44641146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44641138..44641146, + |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.01e-147 | 6 |
defensive cell | 3.35e-25 | 48 |
phagocyte | 3.35e-25 | 48 |
myeloid leukocyte | 1.13e-21 | 72 |
monopoietic cell | 3.41e-20 | 59 |
monocyte | 3.41e-20 | 59 |
monoblast | 3.41e-20 | 59 |
promonocyte | 3.41e-20 | 59 |
macrophage dendritic cell progenitor | 1.51e-19 | 61 |
myeloid lineage restricted progenitor cell | 4.26e-18 | 66 |
granulocyte monocyte progenitor cell | 7.82e-18 | 67 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
leukocyte | 1.45e-11 | 136 |
nongranular leukocyte | 1.81e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.92e-10 | 120 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
neutrophil | 1.10e-09 | 3 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.27e-16 | 76 |
bone element | 1.26e-14 | 82 |
skeletal element | 2.41e-13 | 90 |
immune system | 6.42e-13 | 93 |
hematopoietic system | 2.88e-12 | 98 |
blood island | 2.88e-12 | 98 |
skeletal system | 5.03e-12 | 100 |
hemolymphoid system | 3.84e-11 | 108 |
musculoskeletal system | 3.35e-07 | 167 |