FFCP PHASE1:Hg19::chr20:44582326..44582328,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44582326..44582328,- | |||
|coexpression_cluster_id=C558 | |coexpression_cluster_id=C558 | ||
|description=CAGE_peak_at_chr20:44582326..44582328,- | |description=CAGE_peak_at_chr20:44582326..44582328,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.24e-09;8!CL:0002539;6.34e-08;10 | |ontology_enrichment_celltype_v019=CL:0002570;1.24e-09;8!CL:0002539;6.34e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.24e-09,8;CL:0002539,6.56e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!4.88e-07!8;UBERON:0010039!4.88e-07!8 | |ontology_enrichment_uberon=UBERON:0000945!4.88e-07!8;UBERON:0010039!4.88e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.41e-09;8!UBERON:0004237;6.34e-08;10!UBERON:0004695;6.34e-08;10!UBERON:0002111;6.34e-08;10!UBERON:0004178;6.34e-08;10!UBERON:0003135;2.55e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.41e-09;8!UBERON:0004237;6.34e-08;10!UBERON:0004695;6.34e-08;10!UBERON:0002111;6.34e-08;10!UBERON:0004178;6.34e-08;10!UBERON:0003135;2.55e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.35e-09,8;UBERON:0004237,6.56e-08,10;UBERON:0004695,6.56e-08,10;UBERON:0002111,6.56e-08,10;UBERON:0004178,6.56e-08,10;UBERON:0003135,2.47e-07,11 | |||
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| ||
|short_description=p@chr20:44582326..44582328,- | |short_description=p@chr20:44582326..44582328,- | ||
}} | }} |
Latest revision as of 14:35, 28 July 2015
Short description: | p@chr20:44582326..44582328, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44582326..44582328, - |
Coexpression cluster: | C558_Mesenchymal_testis_Smooth_Endothelial_Placental_Tracheal_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.24e-09 | 8 |
aortic smooth muscle cell | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.35e-09 | 8 |
blood vessel smooth muscle | 6.56e-08 | 10 |
arterial system smooth muscle | 6.56e-08 | 10 |
artery smooth muscle tissue | 6.56e-08 | 10 |
aorta smooth muscle tissue | 6.56e-08 | 10 |
male reproductive organ | 2.47e-07 | 11 |