FFCP PHASE1:Hg19::chr20:44409377..44409407,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:44409377..44409407,- | |||
|description=CAGE_peak_at_chr20:44409377..44409407,- | |||
|id=chr20:44409377..44409407,- | |||
|ontology_enrichment_celltype=CL:0000153!1.07e-10!9;CL:0000447!1.07e-10!9;CL:0000499!1.73e-09!27;CL:0000667!1.91e-09!6;CL:0000058!1.91e-09!6;CL:0000138!1.91e-09!6;CL:0000327!5.12e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000322;3.09e-12;3!CL:0002601;1.30e-09;1!CL:0000319;1.30e-09;1!CL:0000082;2.50e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.77e-12,3;CL:0000319,1.15e-09,1;CL:0002601,2.08e-09,1;CL:0000082,2.86e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.08e-10;1!UBERON:0001041;7.06e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;7.09e-18;2!DOID:3908;5.32e-16;5!DOID:3030;1.30e-09;1!DOID:5662;1.30e-09;1!DOID:1324;2.98e-09;15!DOID:3905;4.02e-09;9!DOID:0050615;1.11e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.58e-18,2;DOID:3908,6.37e-16,5;DOID:5662,7.50e-10,1;DOID:3030,1.15e-09,1;DOID:1324,3.55e-09,15;DOID:3905,4.43e-09,9;DOID:0050615,1.30e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0003937!5.75e-07!12;UBERON:0005399!5.75e-07!12;UBERON:0003064!6.61e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.09e-18;2!UBERON:0002173;7.09e-18;2!UBERON:0002186;7.09e-18;2!UBERON:0004821;3.09e-12;3!UBERON:0007499;3.09e-12;3!UBERON:0003215;3.09e-12;3!UBERON:0010368;3.09e-12;3!UBERON:0009911;3.09e-12;3!UBERON:0002299;3.09e-12;3!UBERON:0006524;3.09e-12;3!UBERON:0008874;3.09e-12;3!UBERON:0002169;3.09e-12;3!UBERON:0004894;3.09e-12;3!UBERON:0009856;2.12e-09;4!UBERON:0004802;2.50e-07;19!UBERON:0000115;2.50e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.58e-18,2;UBERON:0002173,9.58e-18,2;UBERON:0002186,9.58e-18,2;UBERON:0004821,3.77e-12,3;UBERON:0003215,3.77e-12,3;UBERON:0010368,3.77e-12,3;UBERON:0009911,3.77e-12,3;UBERON:0002299,3.77e-12,3;UBERON:0006524,3.77e-12,3;UBERON:0008874,3.77e-12,3;UBERON:0002169,3.77e-12,3;UBERON:0004894,3.77e-12,3;UBERON:0007499,3.15e-08,25;UBERON:0009856,6.64e-08,26;UBERON:0004802,2.86e-07,19;UBERON:0000115,2.86e-07,19 | |||
|phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0,3.48900583986214,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,1.14382394926518,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0.855877976067841,0,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0.975267478179181,0,0,0,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,1.06428319221179,1.05553817648832,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.353024506766001,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65922759459133,0,0,0,0,0,0.542999601753713,0,0,2.39460383124975,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.37494122388632,0,0,0.470531639396343,0,0,0.597019211547496,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.829412415681711,1.32920857278997,0,1.20206087197775,0.761610424337591,1.22061219961398,0,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0.537266523244462,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,1.71488009437418,0.0679697329768317,0,1.06374456795571,0.333694205676207,0.39246546425257,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0.352894871715692,1.12337913364836,0,0,0,0,0,0,0,0,1.84870251452567,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,1.9307228228694,0,4.69281884806909,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,2.00146596706261,0,0,0,0,0,0,3.48900583986214,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,1.14382394926518,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,0.519254429183621,0,0,0,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0.855877976067841,0,0,0.359744915166629,0,0.353437207037059,0.202182481573316,0,0,0.975267478179181,0,0,0,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,1.06428319221179,1.05553817648832,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.353024506766001,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65922759459133,0,0,0,0,0,0.542999601753713,0,0,2.39460383124975,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0.37494122388632,0,0,0.470531639396343,0,0,0.597019211547496,0,0,0,0.251567901752575,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.829412415681711,1.32920857278997,0,1.20206087197775,0.761610424337591,1.22061219961398,0,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0.537266523244462,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,1.71488009437418,0.0679697329768317,0,1.06374456795571,0.333694205676207,0.39246546425257,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.255640214277473,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0.352894871715692,1.12337913364836,0,0,0,0,0,0,0,0,1.84870251452567,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,1.9307228228694,0,4.69281884806909,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr20:44409377..44409407,- | |||
}} | }} |
Latest revision as of 14:30, 28 July 2015
Short description: | p@chr20:44409377..44409407, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44409377..44409407, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.77e-12 | 3 |
mucus secreting cell | 1.15e-09 | 1 |
uterine smooth muscle cell | 2.08e-09 | 1 |
epithelial cell of lung | 2.86e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.58e-18 | 2 |
alveolar duct | 9.58e-18 | 2 |
bronchiole | 9.58e-18 | 2 |
pulmonary alveolus epithelium | 3.77e-12 | 3 |
alveolus | 3.77e-12 | 3 |
pulmonary lobule | 3.77e-12 | 3 |
lobule | 3.77e-12 | 3 |
alveolus of lung | 3.77e-12 | 3 |
alveolar system | 3.77e-12 | 3 |
pulmonary acinus | 3.77e-12 | 3 |
alveolar sac | 3.77e-12 | 3 |
alveolar wall | 3.77e-12 | 3 |
epithelial sac | 3.15e-08 | 25 |
sac | 6.64e-08 | 26 |
respiratory tract epithelium | 2.86e-07 | 19 |
lung epithelium | 2.86e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.58e-18 | 2 |
non-small cell lung carcinoma | 6.37e-16 | 5 |
pleomorphic carcinoma | 7.50e-10 | 1 |
mucinous adenocarcinoma | 1.15e-09 | 1 |
lung cancer | 3.55e-09 | 15 |
lung carcinoma | 4.43e-09 | 9 |
respiratory system cancer | 1.30e-08 | 16 |