FFCP PHASE1:Hg19::chr20:43585117..43585135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:43585117..43585135,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr20:43585117..43585135,- | |description=CAGE_peak_at_chr20:43585117..43585135,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.17e-13;3!CL:0002379;2.28e-10;1 | |ontology_enrichment_celltype_v019=CL:0002541;1.17e-13;3!CL:0002379;2.28e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.17e-13,3;CL:0002379,2.08e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.52e-11;1 | |ontology_enrichment_development_v019=UBERON:0000358;8.52e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;5.46e-13;3!DOID:127;5.46e-13;3!DOID:178;8.52e-11;1!DOID:326;8.52e-11;1!DOID:3978;8.52e-11;1!DOID:3394;8.52e-11;1!DOID:5844;8.52e-11;1!DOID:3620;2.28e-10;1!DOID:3565;2.28e-10;1!DOID:3112;2.28e-10;1!DOID:0060072;5.70e-10;4 | |ontology_enrichment_disease_v019=DOID:0060084;5.46e-13;3!DOID:127;5.46e-13;3!DOID:178;8.52e-11;1!DOID:326;8.52e-11;1!DOID:3978;8.52e-11;1!DOID:3394;8.52e-11;1!DOID:5844;8.52e-11;1!DOID:3620;2.28e-10;1!DOID:3565;2.28e-10;1!DOID:3112;2.28e-10;1!DOID:0060072;5.70e-10;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.03e-13,3;DOID:127,4.03e-13,3;DOID:178,8.14e-11,1;DOID:326,8.14e-11,1;DOID:3978,8.14e-11,1;DOID:3394,8.14e-11,1;DOID:5844,8.14e-11,1;DOID:3112,1.57e-10,1;DOID:3620,2.08e-10,1;DOID:3565,2.08e-10,1;DOID:0060072,4.55e-10,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.17e-13;3!UBERON:0000920;1.17e-13;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.17e-13;3!UBERON:0000920;1.17e-13;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.17e-13,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0.204000691244253,0,0,1.09499540058307,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0,0,0.709336764396714,0.560677600142307,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.587172493218824,0,0.140450806702248,0,0.245668634623536,0,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0.625592599359821,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0.530119073285941,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0.591534000199219,0.168584690078102,0.241011029883482,0.772057809126758,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.268675568108545,0.290633938513962,0,0,0,0,0.288239906833923,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0.799266537048298,0,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0.179060963239896,0.112085143993527,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0.781952530212746,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0.321707842287215,0,0.462629081407967,0.710246901252508,0.246381468041427,0.519254429183621,0.581051892299796,0.241718899183244,0.601519410909855,0,0,0.910455840033585,0.393373244878272,0,0.308061348417659,0,0,0.105551628892876,0,0.340187410553031,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.183138929636687,0,0,0.650060246036521,0,0,0.616194468458578,0.460511024178389,1.10269257987624,0.322260734604821,0.435050081742686,0,0,0,0.960950336825531,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0.245040215981032,0,0,0,0,0.798317485731266,0,0,0.324621940274555,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0.71623345421307,0.593929361665277,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0.361789315876224,0,0.110579259931225,0,0,0.21787692703798,0,0,0,0.23056390438806,0.179515288819544,3.25942115766024,7.01802551410223,0.641183153813036,14.9249737285218,0,0.156980256395025,0.332423363800313,0,0.392125068635479,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0,0.174118413160805,0.17472666824203,0,1.45134496933628,0.584714536689484,0.574808199372465,0,0.0882561266915003,0.451961481561065,0.137041924646751,0,0.0633107959558787,0,0,0,0.799238438328521,0.288180834308212,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,4.79229601197579,0,0,0,0,1.16495949527454,1.18174773460835,0.824158583811665,0.26961417541674,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.550157746388935,0.83088067605837,0,0,0,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0.35857467866569,0,0,0,0,1.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| ||
|short_description=p@chr20:43585117..43585135,- | |short_description=p@chr20:43585117..43585135,- | ||
}} | }} |
Latest revision as of 14:16, 28 July 2015
Short description: | p@chr20:43585117..43585135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:43585117..43585135, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.17e-13 | 3 |
meningothelial cell | 2.08e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.17e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.03e-13 | 3 |
leiomyoma | 4.03e-13 | 3 |
vascular disease | 8.14e-11 | 1 |
ischemia | 8.14e-11 | 1 |
extrinsic cardiomyopathy | 8.14e-11 | 1 |
myocardial ischemia | 8.14e-11 | 1 |
myocardial infarction | 8.14e-11 | 1 |
papillary adenocarcinoma | 1.57e-10 | 1 |
central nervous system cancer | 2.08e-10 | 1 |
meningioma | 2.08e-10 | 1 |
benign neoplasm | 4.55e-10 | 4 |