FFCP PHASE1:Hg19::chr20:401531..401574,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr20:401531..401574,+ to FFCP PHASE1:Hg19::chr20:401531..401574,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:401531..401574,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr20:401531..401574,+ | |||
|id=chr20:401531..401574,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.65e-08;1!CL:0000164;1.65e-08;1!CL:0000502;1.65e-08;1!CL:0000172;1.65e-08;1!CL:0000173;1.65e-08;1!CL:0002553;2.35e-08;1!CL:0000222;6.40e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.23e-08,253;CL:0000167,1.65e-08,1;CL:0000164,1.65e-08,1;CL:0000502,1.65e-08,1;CL:0000172,1.65e-08,1;CL:0000173,1.65e-08,1;CL:0002351,1.65e-08,1;CL:0002553,2.35e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.65e-08;1 | |||
|ontology_enrichment_disease=DOID:305!3.80e-07!106;DOID:0050687!4.60e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0050615;2.97e-10;16!DOID:1325;5.01e-09;7!DOID:3904;5.01e-09;7!DOID:4430;1.65e-08;1!DOID:3111;2.19e-08;1!DOID:3603;2.19e-08;1!DOID:0050619;6.40e-08;1!DOID:1357;6.40e-08;1!DOID:1324;2.65e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.95e-10,16;DOID:305,7.19e-10,106;DOID:1325,2.45e-09,7;DOID:3904,2.45e-09,7;DOID:4430,1.65e-08,1;DOID:3111,2.19e-08,1;DOID:3603,2.19e-08,1;DOID:0050687,8.55e-08,143;DOID:0050619,8.69e-08,1;DOID:1357,8.69e-08,1;DOID:1324,1.72e-07,15 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.40e-08;1!UBERON:0001825;6.40e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.69e-08,1;UBERON:0001825,8.69e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0,0,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0.164437904603676,0.276350017785848,0.579606171470105,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0.198762407366705,1.72046919021225,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0.301586917234893,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0.647142602455851,0,0,1.66435439510497,0.604780586659361,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0,0.519254429183621,0,0,0,0.368323955743585,0.229628896329213,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0,0,0.0890320356467374,0,0.384380134730212,0,0.10115778085555,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,1.32687795048244,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,11.7898540457178,0.146508179271894,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,1.25966373927138,0.102268682502155,0,0,0.0898683511473268,48.8727806864413,0,0,0,0,0,0,0,0,0,0,0.1137934482855,1.77977555204936,1.89110145414349,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0.46112780877612,0,0.217294743844016,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,1.06431964417994,1.75414361006845,0.656923656425674,0.0969890164884194,0,0,0.274083849293502,0,0,3.71547627196126,0.400794101257669,0.213452994739353,1.59847687665704,0.144090417154106,0.114536596165916,0.343189995723929,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.399358000997982,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,1.08599920350743,0,0.979762080328227,0,0.082092520749339,0.170388021785422,0.226624183040251,0.146552233678082,0,0,0,0,0,0,0,0,0,2.37133958277533,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.4576801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| 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| ||
|short_description=p@chr20:401531..401574,+ | |||
}} | }} |
Latest revision as of 14:04, 28 July 2015
Short description: | p@chr20:401531..401574, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:401531..401574, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.23e-08 | 253 |
peptide hormone secreting cell | 1.65e-08 | 1 |
enteroendocrine cell | 1.65e-08 | 1 |
type D enteroendocrine cell | 1.65e-08 | 1 |
somatostatin secreting cell | 1.65e-08 | 1 |
pancreatic D cell | 1.65e-08 | 1 |
progenitor cell of endocrine pancreas | 1.65e-08 | 1 |
lung fibroblast | 2.35e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.69e-08 | 1 |
paranasal sinus | 8.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.95e-10 | 16 |
carcinoma | 7.19e-10 | 106 |
bronchus cancer | 2.45e-09 | 7 |
bronchogenic carcinoma | 2.45e-09 | 7 |
somatostatinoma | 1.65e-08 | 1 |
cystadenocarcinoma | 2.19e-08 | 1 |
mucinous cystadenocarcinoma | 2.19e-08 | 1 |
cell type cancer | 8.55e-08 | 143 |
paranasal sinus cancer | 8.69e-08 | 1 |
maxillary sinus cancer | 8.69e-08 | 1 |
lung cancer | 1.72e-07 | 15 |