FFCP PHASE1:Hg19::chr20:366074..366094,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:366074..366094,+ | |||
|description=CAGE_peak_at_chr20:366074..366094,+ | |||
|id=chr20:366074..366094,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.81e-11;1!CL:0000164;7.81e-11;1!CL:0000502;7.81e-11;1!CL:0000172;7.81e-11;1!CL:0000173;7.81e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.21e-10,1;CL:0000164,1.21e-10,1;CL:0000502,1.21e-10,1;CL:0000172,1.21e-10,1;CL:0000173,1.21e-10,1;CL:0002351,1.21e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.81e-11;1 | |||
|ontology_enrichment_disease=DOID:14566!1.36e-23!239;DOID:162!2.95e-23!235;DOID:0050687!3.91e-19!143;DOID:305!7.48e-14!106;DOID:7!2.53e-08!39;DOID:0050686!3.11e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.81e-11;1!DOID:1357;7.81e-11;1!DOID:4430;7.81e-11;1!DOID:171;3.08e-09;10!DOID:169;2.15e-07;6!DOID:3095;3.55e-07;22!DOID:2994;3.55e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.21e-10,1;DOID:0050619,1.77e-10,1;DOID:1357,1.77e-10,1;DOID:171,2.72e-09,10;DOID:169,2.45e-07,6;DOID:3095,3.61e-07,22;DOID:2994,3.61e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;7.81e-11;1!UBERON:0001764;7.81e-11;1!UBERON:0001825;7.81e-11;1!UBERON:0005208;7.81e-11;1!UBERON:0004145;7.81e-11;1!UBERON:0005946;7.81e-11;1!UBERON:0005965;7.81e-11;1!UBERON:0002078;7.81e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.77e-11,1;UBERON:0005208,6.77e-11,1;UBERON:0005946,6.77e-11,1;UBERON:0005965,6.77e-11,1;UBERON:0002078,6.77e-11,1;UBERON:0001764,1.77e-10,1;UBERON:0001825,1.77e-10,1 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0.154934401160603,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0.56738522469114,1.24564449799115,0,0,0,0,0,0,0,0,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,1.22595118319608,0,0,0,0,0.211931901159562,0.600182192168805,0,0.515281080091258,0.18611685633159,0.337552664482532,0,0.504867548488229,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0,0,1.58040879591855,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,1.68808170616869,0,0.384417447767103,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0.114814448164607,0.546273504020151,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.534192213880424,0.495854746082934,0.192190067365106,0.255225424989168,0.50578890427775,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.284567373393656,0,0.199579371432817,0,0.846694330895531,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0.269605053441981,0.716084698702437,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.341380344856499,0,0.236387681767936,0.344743373241465,0.583209226766509,0.520874984799877,0,0,0,0,0.295547618953547,0,0.653630781113941,0,0,0.341826167541004,1.1528195219403,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.617819694732514,0.208843899010911,0,0,0,0.182454789215666,0.391329237864179,1.45668227720456,0,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,1.70765727617876,0.693373365065693,0,0.195984794828755,0,0,0.171986032471617,0.19351266257817,0,0,0,0.176512253383001,0,0,0.19871461170299,0,0.977756913674015,0.0801588202515337,0,0,0,0.229073192331831,0.343189995723929,0.14405479798815,0.248505071130865,0.235694034616795,0,0,0.203996435272644,0.577901179803038,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0.472699093843342,0.247247575143499,0.337017719270924,0.295282444544246,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0.415045904808692,0,0.454947352624943,0.285465333544967,0.235265819698172,0,0.28984205722165,0,1.63599316893057,0,0,0,0,0.457680136793847,0.151230923763239,0,0,0.159296767163702,1.79921244865442,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0,0,0.214821114084977,0,0,0,0,0.336749488765919,0,0,0,0.521988583930423,0,0,0.489473409012935,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0.633936370075881,0,0.533458648470704,0.172214979660816,0,0,0.559518030877778,0.622077260032973,0.127894371303652,0,3.45985072082972,0.218419276384028,0.169732529954025,0,1.98297222814403,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.161475645631851,0,0.196295437002051,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0.785720083444267,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0.672567444437648,0,0,0,0.115233987555779,0.342976018874837,0,0,0.118193840883968,0.111231401892069,0,0,1.40136081656895,0,0,3.34426181520935,0.0714765441766563,0.158013611732727,0,0.695433089210318,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.33883824611688,0.219881033490858,0.754814217833368,0,0,0.940634592723046,0,1.17838273550813,0,0,0,0.339854229375634,0.187967835959707,0.0644578879735772,0.199882311849858,0.892769693028288,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.101988829741982,0.534434810531121,0.643264296743914,0.250707539292375,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.162806537221949,0.747091421144008,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr20:366074..366094,+ | |||
}} |
Latest revision as of 13:48, 28 July 2015
Short description: | p@chr20:366074..366094, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:366074..366094, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.21e-10 | 1 |
enteroendocrine cell | 1.21e-10 | 1 |
type D enteroendocrine cell | 1.21e-10 | 1 |
somatostatin secreting cell | 1.21e-10 | 1 |
pancreatic D cell | 1.21e-10 | 1 |
progenitor cell of endocrine pancreas | 1.21e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 6.77e-11 | 1 |
right atrium valve | 6.77e-11 | 1 |
outflow tract of atrium | 6.77e-11 | 1 |
outflow part of right atrium | 6.77e-11 | 1 |
right cardiac atrium | 6.77e-11 | 1 |
maxillary sinus | 1.77e-10 | 1 |
paranasal sinus | 1.77e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.21e-10 | 1 |
paranasal sinus cancer | 1.77e-10 | 1 |
maxillary sinus cancer | 1.77e-10 | 1 |
neuroectodermal tumor | 2.72e-09 | 10 |
neuroendocrine tumor | 2.45e-07 | 6 |
germ cell and embryonal cancer | 3.61e-07 | 22 |
germ cell cancer | 3.61e-07 | 22 |