FFCP PHASE1:Hg19::chr20:30411882..30411887,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:30411882..30411887,+
|short_description=p@chr20:30411882..30411887,+
|description=CAGE_peak_at_chr20:30411882..30411887,+
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:30411882..30411887,+ | |||
|description=CAGE_peak_at_chr20:30411882..30411887,+ | |||
|id=chr20:30411882..30411887,+ | |||
|ontology_enrichment_celltype=CL:0000115!4.03e-21!35;CL:0002139!1.90e-20!24;CL:0000213!8.00e-16!57;CL:0000215!8.00e-16!57;CL:0002078!4.46e-15!44;CL:0000071!1.31e-12!18;CL:0002546!1.31e-12!18;CL:0005020!3.60e-10!6;CL:0002138!3.60e-10!6;CL:0005022!3.60e-10!6;CL:1000612!9.52e-08!7;CL:1000746!9.52e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.85e-24;6!CL:0000115;1.33e-20;36!CL:0002139;2.67e-15;24!CL:0002078;5.79e-14;45!CL:0002188;9.85e-14;5!CL:0002144;1.30e-13;3!CL:0000213;5.64e-13;58!CL:0000215;5.64e-13;58!CL:1000746;8.07e-10;7!CL:1000612;8.07e-10;7!CL:0002262;2.73e-09;2!CL:1000398;2.73e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.61e-26,36;CL:0005020,1.92e-24,6;CL:0002138,1.92e-24,6;CL:0005022,1.92e-24,6;CL:0000213,2.61e-21,58;CL:0000215,2.61e-21,58;CL:0002078,6.90e-20,45;CL:0002139,1.95e-15,24;CL:0002144,1.21e-13,3;CL:0002188,1.28e-13,5;CL:1000746,9.71e-10,7;CL:1000612,9.71e-10,7;CL:0002262,1.82e-09,2;CL:1000398,1.82e-09,2;CL:0000222,7.06e-09,121 | |||
|ontology_enrichment_development_v019=CL:0005022;2.85e-24;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.89e-19!57;UBERON:0005068!7.89e-19!57;UBERON:0006241!7.89e-19!57;UBERON:0007135!7.89e-19!57;UBERON:0000025!8.25e-19!194;UBERON:0003075!1.82e-18!86;UBERON:0007284!1.82e-18!86;UBERON:0005743!1.87e-18!86;UBERON:0000955!5.19e-18!69;UBERON:0006238!5.19e-18!69;UBERON:0000477!6.81e-18!286;UBERON:0002616!8.87e-18!59;UBERON:0001017!8.96e-18!82;UBERON:0002346!4.58e-17!90;UBERON:0004111!1.03e-16!241;UBERON:0000073!1.68e-15!94;UBERON:0001016!1.68e-15!94;UBERON:0002049!2.39e-15!79;UBERON:0007798!2.39e-15!79;UBERON:0001986!1.31e-12!18;UBERON:0004638!1.31e-12!18;UBERON:0004852!1.31e-12!18;UBERON:0002780!1.35e-12!41;UBERON:0001890!1.35e-12!41;UBERON:0006240!1.35e-12!41;UBERON:0003056!1.55e-12!61;UBERON:0000055!1.82e-12!69;UBERON:0003080!3.87e-12!42;UBERON:0000033!1.03e-11!123;UBERON:0000119!1.30e-11!312;UBERON:0000153!3.46e-11!129;UBERON:0007811!3.46e-11!129;UBERON:0001893!6.55e-11!34;UBERON:0002020!1.27e-10!34;UBERON:0003528!1.27e-10!34;UBERON:0001869!1.41e-10!32;UBERON:0001950!1.89e-10!20;UBERON:0000483!3.29e-10!309;UBERON:0000956!4.10e-10!25;UBERON:0000203!4.10e-10!25;UBERON:0002791!5.48e-10!33;UBERON:0000487!1.36e-09!22;UBERON:0002619!3.36e-09!22;UBERON:0004535!1.10e-08!110;UBERON:0001981!1.17e-08!60;UBERON:0007500!1.17e-08!60;UBERON:0004537!1.17e-08!60;UBERON:0006965!1.17e-08!60;UBERON:0003076!2.63e-08!15;UBERON:0003057!2.63e-08!15;UBERON:0001009!3.46e-08!113;UBERON:0006914!5.48e-08!25;UBERON:0000074!9.52e-08!7;UBERON:0001229!9.52e-08!7;UBERON:0001230!9.52e-08!7;UBERON:0005749!9.52e-08!7;UBERON:0004199!9.52e-08!7;UBERON:0004209!9.52e-08!7;UBERON:0004198!9.52e-08!7;UBERON:0001473!2.63e-07!8;UBERON:0004536!2.63e-07!8;UBERON:0006558!2.63e-07!8;UBERON:0004121!2.85e-07!169;UBERON:0004733!3.70e-07!12;UBERON:0002028!3.70e-07!12;UBERON:0007277!3.70e-07!12;UBERON:0000924!7.80e-07!173;UBERON:0006601!7.80e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;4.78e-18;8!UBERON:0004536;4.78e-18;8!UBERON:0006558;4.78e-18;8!UBERON:0002465;2.63e-14;10!UBERON:0010523;1.30e-13;3!UBERON:0001915;1.30e-13;3!UBERON:0001982;1.30e-13;3!UBERON:0002021;1.91e-12;5!UBERON:0000074;8.07e-10;7!UBERON:0001229;8.07e-10;7!UBERON:0000353;1.80e-09;15!UBERON:0001281;2.73e-09;2!UBERON:0003497;2.73e-09;2!UBERON:0003909;2.73e-09;2!UBERON:0003835;2.73e-09;2!UBERON:0001950;5.26e-08;20!UBERON:0002619;3.13e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.57e-18,8;UBERON:0004536,3.57e-18,8;UBERON:0006558,3.57e-18,8;UBERON:0002465,2.09e-14,10;UBERON:0010523,1.21e-13,3;UBERON:0001915,1.21e-13,3;UBERON:0001982,1.21e-13,3;UBERON:0002021,1.81e-12,5;UBERON:0010532,9.71e-10,7;UBERON:0000074,9.71e-10,7;UBERON:0001229,9.71e-10,7;UBERON:0001230,9.71e-10,7;UBERON:0003220,9.71e-10,7;UBERON:0005749,9.71e-10,7;UBERON:0004199,9.71e-10,7;UBERON:0004209,9.71e-10,7;UBERON:0004198,9.71e-10,7;UBERON:0000353,1.75e-09,15;UBERON:0001281,1.82e-09,2;UBERON:0003497,1.82e-09,2;UBERON:0003909,1.82e-09,2;UBERON:0003835,1.82e-09,2;UBERON:0005103,1.60e-08,8;UBERON:0000083,1.60e-08,8;UBERON:0009201,1.60e-08,8;UBERON:0006553,1.60e-08,8;UBERON:0003074,1.60e-08,8;UBERON:0003060,1.60e-08,8;UBERON:0003887,1.88e-08,12;UBERON:0002049,2.54e-08,78;UBERON:0007798,2.54e-08,78;UBERON:0001950,6.21e-08,20;UBERON:0000080,1.41e-07,9;UBERON:0002120,1.41e-07,9;UBERON:0004875,1.41e-07,9;UBERON:0005721,1.41e-07,9;UBERON:0005754,1.41e-07,9;UBERON:0007297,1.41e-07,9;UBERON:0000055,1.92e-07,68;UBERON:0000058,2.44e-07,19;UBERON:0002619,3.64e-07,22;UBERON:0001017,5.72e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.443458794925128,1.05401742831751,0.72038491523742,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,2.32575083252396,1.42306505074684,3.3472061276467,4.43112248820062,9.88353737434066,2.68468263302986,0.735326160691737,0.81014194788176,0.267899184852239,0.44905874525234,0.112611480483322,1.53316637465883,0,0.916008719652036,0,0,0,0,0.633152558322899,0,0,0,0,0,0.74000264525148,0,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,4.33099343283221,1.85194205030644,3.04406643575357,0,0,1.47730203652438,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80327710863402,0.87192013766656,1.39342743059805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,3.06168669497728,3.23873874153209,16.9649977959318,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48996451719449,0,6.78569862871576,2.48956981172077,2.11673582723883,0,0.280797178113459,0.456469358066384,0,7.51903431270201,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0,0,0.19924798825107,0,0,1.63629892003448,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.886642856860642,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,1.27009998098677,0,0,0,0,0,0,0,1.09349201984444,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.110929051536852,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,3.85400073370863,0.231522474323834,0,0,3.39681591877069,0,0,0.578742114812744,2.19625172848994,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,1.41696576325585,0,1.8460472781668,1.26035848110859,1.10651603942749,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0,0,1.41828927698629,0,0,0.697573912132975,0.546974809018219,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0.115233987555779,2.7438081509987,1.4953341254903,1.44700101838268,0,0,0,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0.452888530700021,0,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0.845855261818682,2.44939974299593,0,0,0,0,0,0,0,0,1.08786384305464,0.872701380680755,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.443458794925128,1.05401742831751,0.72038491523742,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,0.275118041940067,0.626984899610432,2.32575083252396,1.42306505074684,3.3472061276467,4.43112248820062,9.88353737434066,2.68468263302986,0.735326160691737,0.81014194788176,0.267899184852239,0.44905874525234,0.112611480483322,1.53316637465883,0,0.916008719652036,0,0,0,0,0.633152558322899,0,0,0,0,0,0.74000264525148,0,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,4.33099343283221,1.85194205030644,3.04406643575357,0,0,1.47730203652438,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80327710863402,0.87192013766656,1.39342743059805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,3.06168669497728,3.23873874153209,16.9649977959318,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48996451719449,0,6.78569862871576,2.48956981172077,2.11673582723883,0,0.280797178113459,0.456469358066384,0,7.51903431270201,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0,0,0.19924798825107,0,0,1.63629892003448,0,0,0,0,0,0,0,0,1.93866549219044,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.886642856860642,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0.937057782901357,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,1.27009998098677,0,0,0,0,0,0,0,1.09349201984444,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.110929051536852,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,3.85400073370863,0.231522474323834,0,0,3.39681591877069,0,0,0.578742114812744,2.19625172848994,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,1.41696576325585,0,1.8460472781668,1.26035848110859,1.10651603942749,0.161475645631851,0,0,0,0,0.115525666150338,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0,0,1.41828927698629,0,0,0.697573912132975,0.546974809018219,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0.115233987555779,2.7438081509987,1.4953341254903,1.44700101838268,0,0,0,0.157115589916002,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,0,0,0.452888530700021,0,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0.845855261818682,2.44939974299593,0,0,0,0,0,0,0,0,1.08786384305464,0.872701380680755,0,0,0,0,0.504665699340316,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:30411882..30411887,+ | |||
}} | }} |
Latest revision as of 12:53, 28 July 2015
Short description: | p@chr20:30411882..30411887, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30411882..30411887, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.61e-26 | 36 |
lymphangioblast | 1.92e-24 | 6 |
endothelial cell of lymphatic vessel | 1.92e-24 | 6 |
vascular lymphangioblast | 1.92e-24 | 6 |
lining cell | 2.61e-21 | 58 |
barrier cell | 2.61e-21 | 58 |
meso-epithelial cell | 6.90e-20 | 45 |
endothelial cell of vascular tree | 1.95e-15 | 24 |
capillary endothelial cell | 1.21e-13 | 3 |
glomerular endothelial cell | 1.28e-13 | 5 |
glomerular cell | 9.71e-10 | 7 |
kidney corpuscule cell | 9.71e-10 | 7 |
endothelial cell of sinusoid | 1.82e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.82e-09 | 2 |
mesodermal cell | 7.06e-09 | 121 |