FFCP PHASE1:Hg19::chr20:18488007..18488029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:18488007..18488029,- | |||
|coexpression_cluster_id=C1295 | |||
|description=CAGE_peak_at_chr20:18488007..18488029,- | |description=CAGE_peak_at_chr20:18488007..18488029,- | ||
|id=chr20:18488007..18488029,- | |id=chr20:18488007..18488029,- | ||
|ontology_enrichment_celltype=CL:0000738!8.27e-45!140;CL:0000037!1.19e-36!172;CL:0000566!1.19e-36!172;CL:0002031!1.48e-36!124;CL:0002032!3.90e-35!165;CL:0000837!3.90e-35!165;CL:0000988!4.37e-35!182;CL:0002087!1.31e-34!119;CL:0002057!2.40e-29!42;CL:0000860!2.71e-29!45;CL:0000766!2.24e-24!76;CL:0000557!5.40e-20!71;CL:0002009!5.18e-19!65;CL:0000763!1.39e-18!112;CL:0000049!1.39e-18!112;CL:0000839!5.65e-18!70;CL:0002194!1.87e-17!63;CL:0000576!1.87e-17!63;CL:0000040!1.87e-17!63;CL:0000559!1.87e-17!63;CL:0000838!1.89e-16!52;CL:0000542!6.43e-16!53;CL:0000051!6.43e-16!53;CL:0000084!9.21e-11!25;CL:0000827!9.21e-11!25;CL:0000791!9.28e-11!18;CL:0000789!9.28e-11!18;CL:0002420!9.28e-11!18;CL:0002419!9.28e-11!18;CL:0000790!9.28e-11!18;CL:0000134!1.57e-09!358;CL:0002393!3.20e-09!9;CL:0002397!3.20e-09!9;CL:0002320!8.20e-09!365;CL:0000624!7.77e-08!6;CL:0000094!1.08e-07!8;CL:0000219!1.24e-07!390 | |ontology_enrichment_celltype=CL:0000738!8.27e-45!140;CL:0000037!1.19e-36!172;CL:0000566!1.19e-36!172;CL:0002031!1.48e-36!124;CL:0002032!3.90e-35!165;CL:0000837!3.90e-35!165;CL:0000988!4.37e-35!182;CL:0002087!1.31e-34!119;CL:0002057!2.40e-29!42;CL:0000860!2.71e-29!45;CL:0000766!2.24e-24!76;CL:0000557!5.40e-20!71;CL:0002009!5.18e-19!65;CL:0000763!1.39e-18!112;CL:0000049!1.39e-18!112;CL:0000839!5.65e-18!70;CL:0002194!1.87e-17!63;CL:0000576!1.87e-17!63;CL:0000040!1.87e-17!63;CL:0000559!1.87e-17!63;CL:0000838!1.89e-16!52;CL:0000542!6.43e-16!53;CL:0000051!6.43e-16!53;CL:0000084!9.21e-11!25;CL:0000827!9.21e-11!25;CL:0000791!9.28e-11!18;CL:0000789!9.28e-11!18;CL:0002420!9.28e-11!18;CL:0002419!9.28e-11!18;CL:0000790!9.28e-11!18;CL:0000134!1.57e-09!358;CL:0002393!3.20e-09!9;CL:0002397!3.20e-09!9;CL:0002320!8.20e-09!365;CL:0000624!7.77e-08!6;CL:0000094!1.08e-07!8;CL:0000219!1.24e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.41e-17;33!CL:0002057;3.41e-17;33!CL:0000766;1.85e-14;69!CL:0000473;1.17e-12;39!CL:0000234;1.17e-12;39!CL:0000623;1.74e-12;3!CL:0000094;3.08e-12;8!CL:0000081;3.24e-12;11!CL:0000791;5.67e-12;18!CL:0000789;5.67e-12;18!CL:0002419;5.67e-12;18!CL:0000624;4.53e-10;6!CL:0000576;6.44e-10;48!CL:0002087;1.12e-09;104!CL:0000738;2.15e-09;136!CL:0000771;2.81e-09;2!CL:0000084;3.00e-08;25!CL:0000542;1.03e-07;53!CL:0000097;5.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.18e-34,136;CL:0002031,7.35e-29,120;CL:0002032,1.75e-27,161;CL:0000837,1.75e-27,161;CL:0000037,5.91e-26,168;CL:0000988,1.12e-25,177;CL:0000766,3.24e-23,72;CL:0002087,6.63e-23,115;CL:0000860,1.95e-18,42;CL:0002057,1.95e-18,42;CL:0000557,1.76e-16,67;CL:0000473,1.17e-15,48;CL:0000234,1.17e-15,48;CL:0000763,5.49e-15,108;CL:0000049,5.49e-15,108;CL:0000839,5.90e-15,66;CL:0002009,6.26e-13,61;CL:0000838,1.29e-12,52;CL:0000623,1.29e-12,3;CL:0000825,1.29e-12,3;CL:0000542,2.59e-12,53;CL:0000051,2.59e-12,53;CL:0000094,2.73e-12,8;CL:0000081,3.14e-12,11;CL:0000791,6.32e-12,18;CL:0000789,6.32e-12,18;CL:0002420,6.32e-12,18;CL:0002419,6.32e-12,18;CL:0000790,6.32e-12,18;CL:0002194,8.78e-12,59;CL:0000576,8.78e-12,59;CL:0000040,8.78e-12,59;CL:0000559,8.78e-12,59;CL:0000624,4.29e-10,6;CL:0000771,2.72e-09,2;CL:0000134,3.09e-08,354;CL:0000084,3.23e-08,25;CL:0000827,3.23e-08,25;CL:0002320,6.69e-08,361;CL:0000097,4.49e-07,5;CL:0002028,4.49e-07,5;CL:0000219,9.94e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-14;42!CL:0000790;5.67e-12;18!CL:0000051;1.03e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.24e-17!102;UBERON:0003061!1.24e-17!102;UBERON:0002371!5.16e-17!80;UBERON:0002193!3.37e-15!112;UBERON:0001474!8.53e-15!86;UBERON:0002405!6.94e-14!115;UBERON:0004765!1.56e-10!101;UBERON:0001434!1.56e-10!101;UBERON:0002384!1.64e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.43e-14,76;UBERON:0002390,1.04e-13,98;UBERON:0003061,1.04e-13,98;UBERON:0002405,2.70e-13,93;UBERON:0001474,1.23e-12,82;UBERON:0002193,5.95e-12,108;UBERON:0004765,4.09e-11,90;UBERON:0001434,1.47e-09,100;UBERON:0002384,1.91e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.157421562627358,2.36018566109342,0.383829398097213,0.77408061658038,0,0,0,0,0.426507697462265,0.293600439334847,0.553995408531877,0.601633342410425,1.08505435357926,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0,1.0246428261164,5.20260905754887,1.03423704220986,1.29096936716765,4.06279459783025,0,0.545812300115692,1.34834090667051,0.306083892370903,0.962787081228281,3.83602275479425,0,0.797854630486527,0.426224750532694,0.580418477257168,1.70215567407342,1.86846674698672,1.25624332628372,1.0429658368404,2.38907729175628,0,0.736555271975129,1.26584954976354,0.845021145247767,1.06302149982522,0.628975936525128,1.34794357375794,0.450530678524519,0.48217676009124,0.285012743741249,0.59675003159727,0.365328307529268,0,1.63841583378639,0.889509253863555,0.426730222566507,0.800791974072025,1.14950487990897,0,0.954053754535364,0,1.76171156811282,1.52909291250092,1.32171328579026,0.560508562981536,0,0.983548850569165,1.96505381374582,3.49522548299166,0.334372990781356,0.977766799900771,2.36723902867367,3.89653456815823,1.00269411196656,1.17842362989935,1.10766947291811,1.89562704635511,1.15282187753108,0.780356085359269,0.493313713811028,0.829050053357545,0,1.18629250529648,2.1403266247177,2.09071047609954,0.226618685395132,1.14966148080576,2.40539211837841,1.77113784413652,0.318565414324097,0,0,0.301150238155546,1.02389288923535,0,0.710331756132051,0,2.62088766192152,2.13952156626806,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,1.97065295158377,0,0,1.15295962733569,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.672510863961164,2.1673383622212,2.58753089831421,2.95188983443421,0,0,0,0,0,1.49801404789436,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.835218521685727,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,1.18608451472249,0.617819694732514,0,0.067401132980677,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0,0.0674035438541849,0,0.169346664131569,0,0,0,0.412618309791701,0.415440338029185,0.674921674654501,1.5476039091159,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.395223263795889,0,0.638341257770182,0,0,0,0.983617892129413,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.389720617678777,0,0.490696182767533,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0,0,0,0.315446980005013,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0.219881033490858,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,2.11054028605917,0.112131862580613,0.0636471582781649,0,0,0,0.134704106029175,0,0,0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| ||
|short_description=p@chr20:18488007..18488029,- | |short_description=p@chr20:18488007..18488029,- | ||
}} | }} |
Latest revision as of 12:09, 28 July 2015
Short description: | p@chr20:18488007..18488029, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:18488007..18488029, - |
Coexpression cluster: | C1295_Eosinophils_CD4_CD14_Neutrophils_CD8_Basophils_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.43e-14 | 76 |
hematopoietic system | 1.04e-13 | 98 |
blood island | 1.04e-13 | 98 |
immune system | 2.70e-13 | 93 |
bone element | 1.23e-12 | 82 |
hemolymphoid system | 5.95e-12 | 108 |
skeletal element | 4.09e-11 | 90 |
skeletal system | 1.47e-09 | 100 |
connective tissue | 1.91e-07 | 371 |