FFCP PHASE1:Hg19::chr20:10637517..10637521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:10637517..10637521,- | |||
|description=CAGE_peak_at_chr20:10637517..10637521,- | |description=CAGE_peak_at_chr20:10637517..10637521,- | ||
|id=chr20:10637517..10637521,- | |id=chr20:10637517..10637521,- | ||
|ontology_enrichment_celltype=CL:0000223!1.54e-07!59 | |ontology_enrichment_celltype=CL:0000223!1.54e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000307;9.75e-09;3!CL:0000222;3.61e-07;1!CL:0000313;3.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.42e-09,3;CL:0000069,7.42e-09,3;CL:0000307,7.42e-09,3;CL:0000377,7.42e-09,3;CL:0000313,4.34e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;9.75e-09;3!UBERON:0005425;3.61e-07;1 | |||
|ontology_enrichment_disease=DOID:305!9.61e-11!106;DOID:1749!6.32e-10!14;DOID:0050687!4.96e-09!143 | |ontology_enrichment_disease=DOID:305!9.61e-11!106;DOID:1749!6.32e-10!14;DOID:0050687!4.96e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.31e-15;14!DOID:3347;1.44e-07;1!DOID:2152;3.61e-07;1!DOID:3112;3.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.35e-15,14;DOID:305,5.16e-08,106;DOID:3347,1.63e-07,1;DOID:3112,2.67e-07,1;DOID:2152,4.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.53e-07!169;UBERON:0000925!6.53e-07!169;UBERON:0006595!6.53e-07!169 | |ontology_enrichment_uberon=UBERON:0004119!6.53e-07!169;UBERON:0000925!6.53e-07!169;UBERON:0006595!6.53e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.44e-07;1!UBERON:0000941;3.61e-07;1!UBERON:0000997;3.61e-07;1!UBERON:0004911;3.61e-07;1!UBERON:0001785;3.61e-07;1!UBERON:0002464;3.61e-07;1!UBERON:0004904;3.61e-07;1!UBERON:0005056;3.61e-07;1!UBERON:0001021;3.61e-07;1!UBERON:0004176;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.54e-07,1;UBERON:0000997,1.97e-07,1;UBERON:0005056,1.97e-07,1;UBERON:0000941,2.23e-07,1;UBERON:0001785,2.23e-07,1;UBERON:0002464,2.23e-07,1;UBERON:0004904,2.23e-07,1;UBERON:0001021,2.23e-07,1;UBERON:0003902,2.23e-07,1;UBERON:0005425,2.23e-07,1;UBERON:0004911,4.34e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,1.1507695692886,0.768482119587302,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0.75374599577023,1.0429658368404,0,0,0,0,0,0.212604299965044,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.283604451492204,0,0,0.523916301990851,0,0,0,0,0,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0.169560592310488,0.966304265816484,3.00020732649918,0.573609190778008,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,1.1240175325762,0.301586917234893,0.370353780634118,0,0,0,0.115930404975077,0,0.721832238805369,0,0.570762456703795,0,0,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,3.44585807502342,0,0,0,0,0,0,0,0.385029108839245,0.254094624222463,1.30139853857622,0.773288812777695,0.502548796003046,0,0,2.99161459204025,0.414415513436035,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0.321707842287215,0,0,0,0,0.519254429183621,0,0.120859449591622,0.40101294060657,0.368323955743585,0,0,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,4.08360679982669,0.708104465988849,0,0,0,0,1.06461206063404,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,1.73199802905922,0,1.08890984861323,0.376575203107117,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0.191505370132367,0,0,0,0.684704037099577,0.47003968731907,2.50634477090067,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0.333926115068718,0,1.05562704063997,0.796991953004279,0,0,0.409074730008619,0.123084805461069,0,0.269605053441981,1.07412704805365,0,0.197286811273867,0,2.22273980289274,0,0.0927680981618513,0,0.520855522170466,0.524759999977174,0,0.910347586283997,0.762760950878299,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,1.11538995422883,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,1.46909527343233,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.247127877893006,0,0.067401132980677,0.802577647298789,0,0,0.978323094660449,0.242780379534093,0,0,0,0.31593289814244,0,0,0,0.661983911750998,0.627865836814451,0,0.569219092059585,0.138674673013139,0,1.46988596121566,0.69647365264322,0.34945333648406,0,0,0.0730893170861856,0,0.387956065953678,0,0.451961481561065,0.274083849293502,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0.372757606696298,0.471388069233591,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,0,0,0,0.201550417460179,0,1.16495949527454,0.709048640765013,0.247247575143499,0.741438982396034,0.984274815147488,0,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.182248669974074,0.670869375198532,0,0.577000469484979,0.739202355635845,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.52893040697076,0.855434189421647,0,0,0.628817220398664,0.828478110694391,0.496166021811951,0,0,2.55336503108073,0,0.2506898940227,0.306345576763462,0.327872630709804,0.785270481251171,0,0,0,0,0.443716206147409,0.124192805882767,0.276697269872462,0.874862855734746,0,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0,0.211312123358627,0.19998739585493,0.213383459388282,0,0,0.18410595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| ||
|short_description=p@chr20:10637517..10637521,- | |short_description=p@chr20:10637517..10637521,- | ||
}} | }} |
Latest revision as of 11:53, 28 July 2015
Short description: | p@chr20:10637517..10637521, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10637517..10637521, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.42e-09 | 3 |
branched duct epithelial cell | 7.42e-09 | 3 |
tracheal epithelial cell | 7.42e-09 | 3 |
tracheoblast | 7.42e-09 | 3 |
serous secreting cell | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.54e-07 | 1 |
mammalian vulva | 1.97e-07 | 1 |
external female genitalia | 1.97e-07 | 1 |
cranial nerve II | 2.23e-07 | 1 |
cranial nerve | 2.23e-07 | 1 |
nerve trunk | 2.23e-07 | 1 |
nerve connecting eye with brain | 2.23e-07 | 1 |
nerve | 2.23e-07 | 1 |
retinal neural layer | 2.23e-07 | 1 |
presumptive neural retina | 2.23e-07 | 1 |
epithelium of female gonad | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.35e-15 | 14 |
carcinoma | 5.16e-08 | 106 |
osteosarcoma | 1.63e-07 | 1 |
papillary adenocarcinoma | 2.67e-07 | 1 |
ovary epithelial cancer | 4.34e-07 | 1 |