FFCP PHASE1:Hg19::chr1:98520013..98520035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:98520013..98520035,+ | |||
|description=CAGE_peak_at_chr1:98520013..98520035,+ | |description=CAGE_peak_at_chr1:98520013..98520035,+ | ||
|id=chr1:98520013..98520035,+ | |id=chr1:98520013..98520035,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.35e-09!25;CL:0000128!6.31e-09!7;CL:0000126!6.31e-09!7;CL:0000127!6.31e-09!7;CL:0002453!6.31e-09!7;CL:0000243!6.50e-09!15;CL:0000125!6.50e-09!15;CL:0000030!6.50e-09!15;CL:0000339!6.50e-09!15;CL:0000076!1.03e-07!62;CL:0000095!1.03e-07!17;CL:0000123!1.03e-07!17;CL:0000066!1.93e-07!254;CL:0002605!8.69e-07!3 | |ontology_enrichment_celltype=CL:0002319!1.35e-09!25;CL:0000128!6.31e-09!7;CL:0000126!6.31e-09!7;CL:0000127!6.31e-09!7;CL:0002453!6.31e-09!7;CL:0000243!6.50e-09!15;CL:0000125!6.50e-09!15;CL:0000030!6.50e-09!15;CL:0000339!6.50e-09!15;CL:0000076!1.03e-07!62;CL:0000095!1.03e-07!17;CL:0000123!1.03e-07!17;CL:0000066!1.93e-07!254;CL:0002605!8.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.98e-18;3!CL:0000243;7.48e-16;15!CL:0000125;7.48e-16;15!CL:0000095;4.35e-14;17!CL:0000128;1.61e-13;7!CL:0000126;1.61e-13;7!CL:0000127;1.61e-13;7!CL:0002319;1.22e-09;25!CL:0002573;6.41e-09;2!CL:1001319;9.50e-07;1!CL:1000600;9.50e-07;1 | |ontology_enrichment_celltype_v019=CL:0002605;3.98e-18;3!CL:0000243;7.48e-16;15!CL:0000125;7.48e-16;15!CL:0000095;4.35e-14;17!CL:0000128;1.61e-13;7!CL:0000126;1.61e-13;7!CL:0000127;1.61e-13;7!CL:0002319;1.22e-09;25!CL:0002573;6.41e-09;2!CL:1001319;9.50e-07;1!CL:1000600;9.50e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.88e-18,3;CL:0000243,6.70e-16,15;CL:0000125,6.70e-16,15;CL:0000030,6.70e-16,15;CL:0000339,6.70e-16,15;CL:0000095,3.94e-14,17;CL:0000123,3.94e-14,17;CL:0000128,1.83e-13,7;CL:0000126,1.83e-13,7;CL:0000127,1.83e-13,7;CL:0002453,1.83e-13,7;CL:0000333,1.91e-11,41;CL:0002319,1.14e-09,25;CL:0000133,3.67e-09,59;CL:0002573,6.42e-09,2;CL:0000221,3.38e-07,72;CL:1001319,6.02e-07,1;CL:1000600,6.02e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000339;7.48e-16;15!CL:0000133;6.61e-07;59 | |ontology_enrichment_development_v019=CL:0000339;7.48e-16;15!CL:0000133;6.61e-07;59 | ||
|ontology_enrichment_disease=DOID:1749!6.57e-12!14;DOID:305!2.04e-08!106;DOID:0050687!6.67e-07!143 | |ontology_enrichment_disease=DOID:1749!6.57e-12!14;DOID:305!2.04e-08!106;DOID:0050687!6.67e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:6193;9.50e-07;1!DOID:5662;9.50e-07;1 | |ontology_enrichment_disease_v019=DOID:6193;9.50e-07;1!DOID:5662;9.50e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.85e-10,143;DOID:305,7.96e-09,106;DOID:14566,1.74e-07,239;DOID:5662,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002066!3.80e-08!5;UBERON:0000477!6.03e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000119!1.77e-07!312;UBERON:0000025!4.62e-07!194;UBERON:0004111!7.47e-07!241 | |ontology_enrichment_uberon=UBERON:0002066!3.80e-08!5;UBERON:0000477!6.03e-08!286;UBERON:0000483!1.05e-07!309;UBERON:0000119!1.77e-07!312;UBERON:0000025!4.62e-07!194;UBERON:0004111!7.47e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000010;1.47e-10;8!UBERON:0002294;1.23e-07;7!UBERON:0001173;1.23e-07;7!UBERON:0004645;9.50e-07;1!UBERON:0004913;9.50e-07;1!UBERON:0003703;9.50e-07;1!UBERON:0001256;9.50e-07;1!UBERON:0001259;9.50e-07;1!UBERON:0001174;9.50e-07;1!UBERON:0004914;9.50e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000010;1.47e-10;8!UBERON:0002294;1.23e-07;7!UBERON:0001173;1.23e-07;7!UBERON:0004645;9.50e-07;1!UBERON:0004913;9.50e-07;1!UBERON:0003703;9.50e-07;1!UBERON:0001256;9.50e-07;1!UBERON:0001259;9.50e-07;1!UBERON:0001174;9.50e-07;1!UBERON:0004914;9.50e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,6.49e-12,2;UBERON:0000010,1.75e-10,8;UBERON:0005911,1.65e-07,82;UBERON:0004645,6.02e-07,1;UBERON:0001256,6.02e-07,1;UBERON:0001259,6.02e-07,1;UBERON:0004913,6.38e-07,1;UBERON:0003703,6.38e-07,1;UBERON:0001174,6.38e-07,1;UBERON:0004914,6.38e-07,1 | |||
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| ||
|short_description=p@chr1:98520013..98520035,+ | |short_description=p@chr1:98520013..98520035,+ | ||
}} | }} |
Latest revision as of 11:43, 28 July 2015
Short description: | p@chr1:98520013..98520035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98520013..98520035, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.88e-18 | 3 |
glial cell (sensu Vertebrata) | 6.70e-16 | 15 |
glial cell | 6.70e-16 | 15 |
glioblast | 6.70e-16 | 15 |
glioblast (sensu Vertebrata) | 6.70e-16 | 15 |
neuron associated cell | 3.94e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 3.94e-14 | 17 |
oligodendrocyte | 1.83e-13 | 7 |
macroglial cell | 1.83e-13 | 7 |
astrocyte | 1.83e-13 | 7 |
oligodendrocyte precursor cell | 1.83e-13 | 7 |
migratory neural crest cell | 1.91e-11 | 41 |
neural cell | 1.14e-09 | 25 |
neurectodermal cell | 3.67e-09 | 59 |
Schwann cell | 6.42e-09 | 2 |
ectodermal cell | 3.38e-07 | 72 |
bladder cell | 6.02e-07 | 1 |
lower urinary tract cell | 6.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 6.49e-12 | 2 |
peripheral nervous system | 1.75e-10 | 8 |
endo-epithelium | 1.65e-07 | 82 |
urinary bladder urothelium | 6.02e-07 | 1 |
wall of urinary bladder | 6.02e-07 | 1 |
mucosa of urinary bladder | 6.02e-07 | 1 |
hepatopancreatic ampulla | 6.38e-07 | 1 |
extrahepatic bile duct | 6.38e-07 | 1 |
common bile duct | 6.38e-07 | 1 |
duodenal papilla | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.85e-10 | 143 |
carcinoma | 7.96e-09 | 106 |
disease of cellular proliferation | 1.74e-07 | 239 |
pleomorphic carcinoma | 6.76e-07 | 1 |