FFCP PHASE1:Hg19::chr1:98409165..98409171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:98409165..98409171,+ | |||
|coexpression_cluster_id=C4001 | |||
|description=CAGE_peak_at_chr1:98409165..98409171,+ | |description=CAGE_peak_at_chr1:98409165..98409171,+ | ||
|id=chr1:98409165..98409171,+ | |id=chr1:98409165..98409171,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.16e-21!180;CL:0000359!6.99e-21!32;CL:0002620!1.16e-18!23;CL:0000192!1.14e-14!42;CL:0000514!1.14e-14!42;CL:0000057!3.67e-13!75;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!2.60e-10!54;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000183!4.89e-09!59;CL:0000222!5.97e-09!119;CL:0002539!9.75e-09!10;CL:0002595!3.12e-08!5 | |ontology_enrichment_celltype=CL:0000055!3.16e-21!180;CL:0000359!6.99e-21!32;CL:0002620!1.16e-18!23;CL:0000192!1.14e-14!42;CL:0000514!1.14e-14!42;CL:0000057!3.67e-13!75;CL:0000680!9.90e-11!57;CL:0000056!9.90e-11!57;CL:0000355!9.90e-11!57;CL:0000187!2.60e-10!54;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000183!4.89e-09!59;CL:0000222!5.97e-09!119;CL:0002539!9.75e-09!10;CL:0002595!3.12e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.47e-15;4!CL:0002547;2.47e-15;4!CL:0002539;1.67e-13;10!CL:0000359;2.23e-10;32!CL:0002589;2.07e-08;2!CL:0000192;9.39e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.96e-15,4;CL:0002547,2.96e-15,4;CL:0002539,2.16e-13,10;CL:0000359,4.25e-11,32;CL:0002589,2.67e-08,2;CL:0000192,3.00e-08,43;CL:0000514,3.00e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000514;9.39e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;2.48e-24;33!UBERON:0004571;2.48e-24;33!UBERON:0000947;3.37e-24;21!UBERON:0010191;3.37e-24;21!UBERON:0001637;2.97e-19;42!UBERON:0003509;2.97e-19;42!UBERON:0004572;2.97e-19;42!UBERON:0004797;2.47e-15;4!UBERON:0000415;2.47e-15;4!UBERON:0007240;2.47e-15;4!UBERON:0005742;2.47e-15;4!UBERON:0005734;2.47e-15;4!UBERON:0004664;2.47e-15;4!UBERON:0004663;2.47e-15;4!UBERON:0004237;1.67e-13;10!UBERON:0004695;1.67e-13;10!UBERON:0002111;1.67e-13;10!UBERON:0004178;1.67e-13;10!UBERON:0001135;3.39e-09;15!UBERON:0001529;2.07e-08;2!UBERON:0007204;2.07e-08;2!UBERON:0007500;2.33e-07;56!UBERON:0001981;2.33e-07;56!UBERON:0004537;2.33e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.07e-27,33;UBERON:0004571,8.07e-27,33;UBERON:0000947,4.31e-24,21;UBERON:0010191,4.31e-24,21;UBERON:0001637,5.99e-21,42;UBERON:0003509,5.99e-21,42;UBERON:0004572,5.99e-21,42;UBERON:0000415,2.96e-15,4;UBERON:0007240,2.96e-15,4;UBERON:0005742,2.96e-15,4;UBERON:0005734,2.96e-15,4;UBERON:0004664,2.96e-15,4;UBERON:0004663,2.96e-15,4;UBERON:0007500,9.95e-15,59;UBERON:0001981,9.95e-15,59;UBERON:0004537,9.95e-15,59;UBERON:0006965,9.95e-15,59;UBERON:0004237,2.16e-13,10;UBERON:0004695,2.16e-13,10;UBERON:0002111,2.16e-13,10;UBERON:0004178,2.16e-13,10;UBERON:0000055,1.09e-12,68;UBERON:0002049,5.69e-11,78;UBERON:0007798,5.69e-11,78;UBERON:0004872,2.89e-10,83;UBERON:0001135,4.01e-09,15;UBERON:0004797,4.04e-09,7;UBERON:0001529,2.67e-08,2;UBERON:0007204,2.67e-08,2;UBERON:0004535,1.23e-07,109;UBERON:0001009,2.07e-07,112;UBERON:0003914,4.64e-07,117 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,1.69592382577203,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.25326102332916,5.29636723252875,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,1.18143432568886,1.26668106709558,0.757301322732344,0.0920498986422993,0.161646056818812,1.06502877754984,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,7.24068397710472,0,0,1.06461206063404,0.869932992075073,0.55597265731176,1.14499909393593,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0.551365343546124,1.99031692572366,0.438450885253763,0,0,0,0.92947049429925,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0,0,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,1.69592382577203,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.25326102332916,5.29636723252875,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0.300091096084402,0.103052529238439,0.515281080091258,0,1.18143432568886,1.26668106709558,0.757301322732344,0.0920498986422993,0.161646056818812,1.06502877754984,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.410635780069046,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,7.24068397710472,0,0,1.06461206063404,0.869932992075073,0.55597265731176,1.14499909393593,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0,0,0,0.551365343546124,1.99031692572366,0.438450885253763,0,0,0,0.92947049429925,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:98409165..98409171,+ | |short_description=p@chr1:98409165..98409171,+ | ||
}} | }} |
Latest revision as of 11:41, 28 July 2015
Short description: | p@chr1:98409165..98409171, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:98409165..98409171, + |
Coexpression cluster: | C4001_Fibroblast_Smooth_mesenchymal_Mesenchymal_mesothelioma_thyroid_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.96e-15 | 4 |
fibroblast of the aortic adventitia | 2.96e-15 | 4 |
aortic smooth muscle cell | 2.16e-13 | 10 |
vascular associated smooth muscle cell | 4.25e-11 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 2.67e-08 | 2 |
smooth muscle cell | 3.00e-08 | 43 |
smooth muscle myoblast | 3.00e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 8.07e-27 | 33 |
systemic arterial system | 8.07e-27 | 33 |
aorta | 4.31e-24 | 21 |
aortic system | 4.31e-24 | 21 |
artery | 5.99e-21 | 42 |
arterial blood vessel | 5.99e-21 | 42 |
arterial system | 5.99e-21 | 42 |
artery wall | 2.96e-15 | 4 |
tunica adventitia of artery | 2.96e-15 | 4 |
adventitia | 2.96e-15 | 4 |
tunica adventitia of blood vessel | 2.96e-15 | 4 |
aorta tunica adventitia | 2.96e-15 | 4 |
aorta wall | 2.96e-15 | 4 |
epithelial tube open at both ends | 9.95e-15 | 59 |
blood vessel | 9.95e-15 | 59 |
blood vasculature | 9.95e-15 | 59 |
vascular cord | 9.95e-15 | 59 |
blood vessel smooth muscle | 2.16e-13 | 10 |
arterial system smooth muscle | 2.16e-13 | 10 |
artery smooth muscle tissue | 2.16e-13 | 10 |
aorta smooth muscle tissue | 2.16e-13 | 10 |
vessel | 1.09e-12 | 68 |
vasculature | 5.69e-11 | 78 |
vascular system | 5.69e-11 | 78 |
splanchnic layer of lateral plate mesoderm | 2.89e-10 | 83 |
smooth muscle tissue | 4.01e-09 | 15 |
blood vessel layer | 4.04e-09 | 7 |
brachiocephalic artery | 2.67e-08 | 2 |
brachiocephalic vasculature | 2.67e-08 | 2 |
cardiovascular system | 1.23e-07 | 109 |
circulatory system | 2.07e-07 | 112 |
epithelial tube | 4.64e-07 | 117 |