FFCP PHASE1:Hg19::chr1:94752932..94752936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94752932..94752936,+ | |||
|coexpression_cluster_id=C526 | |||
|description=CAGE_peak_at_chr1:94752932..94752936,+ | |description=CAGE_peak_at_chr1:94752932..94752936,+ | ||
|id=chr1:94752932..94752936,+ | |id=chr1:94752932..94752936,+ | ||
|ontology_enrichment_celltype=CL:0000192!1.55e-25!42;CL:0000514!1.55e-25!42;CL:0000359!5.62e-23!32;CL:0000680!4.81e-21!57;CL:0000056!4.81e-21!57;CL:0000355!4.81e-21!57;CL:0000187!1.54e-18!54;CL:0000183!1.79e-16!59;CL:0000393!4.20e-16!60;CL:0000211!4.20e-16!60;CL:0002494!1.27e-12!16;CL:0000055!1.87e-12!180;CL:0002594!4.06e-12!4;CL:1000306!6.31e-11!4;CL:0002547!6.31e-11!4;CL:0000569!1.04e-10!4;CL:0000011!1.04e-10!4;CL:0002592!4.19e-10!3;CL:0000222!1.57e-08!119 | |ontology_enrichment_celltype=CL:0000192!1.55e-25!42;CL:0000514!1.55e-25!42;CL:0000359!5.62e-23!32;CL:0000680!4.81e-21!57;CL:0000056!4.81e-21!57;CL:0000355!4.81e-21!57;CL:0000187!1.54e-18!54;CL:0000183!1.79e-16!59;CL:0000393!4.20e-16!60;CL:0000211!4.20e-16!60;CL:0002494!1.27e-12!16;CL:0000055!1.87e-12!180;CL:0002594!4.06e-12!4;CL:1000306!6.31e-11!4;CL:0002547!6.31e-11!4;CL:0000569!1.04e-10!4;CL:0000011!1.04e-10!4;CL:0002592!4.19e-10!3;CL:0000222!1.57e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-46;32!CL:0002592;4.07e-34;3!CL:0000192;4.81e-31;43!CL:0002595;8.07e-21;5!CL:0000187;4.90e-14;55!CL:0002379;7.03e-13;1!CL:0000393;1.64e-12;61!CL:0000211;1.64e-12;61!CL:0002591;1.75e-12;1!CL:0002601;3.64e-12;1!CL:0002539;1.24e-10;10!CL:0002593;6.80e-07;2!CL:0002494;7.31e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.46e-48,32;CL:0000192,1.23e-41,43;CL:0000514,1.23e-41,43;CL:0002592,3.85e-34,3;CL:0000187,3.43e-32,55;CL:0000680,1.94e-30,58;CL:0000056,1.94e-30,58;CL:0000355,1.94e-30,58;CL:0000393,7.37e-29,61;CL:0000211,7.37e-29,61;CL:0002595,7.81e-21,5;CL:0000222,1.15e-13,121;CL:0002379,7.03e-13,1;CL:0002591,1.75e-12,1;CL:0002601,4.31e-12,1;CL:0002539,1.24e-10,10;CL:0002321,8.37e-08,250;CL:0002593,6.80e-07,2;CL:0002494,7.23e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.81e-31;43!CL:0000355;2.15e-15;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;7.03e-13;1!DOID:3565;7.03e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.03e-13,1;DOID:3565,7.03e-13,1 | |||
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|short_description=p@chr1:94752932..94752936,+ | |short_description=p@chr1:94752932..94752936,+ | ||
}} | }} |
Latest revision as of 11:31, 28 July 2015
Short description: | p@chr1:94752932..94752936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94752932..94752936, + |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.46e-48 | 32 |
smooth muscle cell | 1.23e-41 | 43 |
smooth muscle myoblast | 1.23e-41 | 43 |
smooth muscle cell of the coronary artery | 3.85e-34 | 3 |
muscle cell | 3.43e-32 | 55 |
muscle precursor cell | 1.94e-30 | 58 |
myoblast | 1.94e-30 | 58 |
multi-potent skeletal muscle stem cell | 1.94e-30 | 58 |
electrically responsive cell | 7.37e-29 | 61 |
electrically active cell | 7.37e-29 | 61 |
smooth muscle cell of the subclavian artery | 7.81e-21 | 5 |
mesodermal cell | 1.15e-13 | 121 |
meningothelial cell | 7.03e-13 | 1 |
smooth muscle cell of the pulmonary artery | 1.75e-12 | 1 |
uterine smooth muscle cell | 4.31e-12 | 1 |
aortic smooth muscle cell | 1.24e-10 | 10 |
embryonic cell | 8.37e-08 | 250 |
smooth muscle cell of the internal thoracic artery | 6.80e-07 | 2 |
cardiocyte | 7.23e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.03e-13 | 1 |
meningioma | 7.03e-13 | 1 |