FFCP PHASE1:Hg19::chr1:94535907..94535920,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94535907..94535920,+ | |||
|description=CAGE_peak_at_chr1:94535907..94535920,+ | |description=CAGE_peak_at_chr1:94535907..94535920,+ | ||
|id=chr1:94535907..94535920,+ | |id=chr1:94535907..94535920,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.15e-12!35;CL:0002139!5.03e-11!24;CL:0000064!2.28e-09!3;CL:0005012!2.28e-09!3;CL:0000067!2.28e-09!3;CL:0002304!2.28e-09!3;CL:0002078!4.15e-09!44;CL:0000213!1.48e-07!57;CL:0000215!1.48e-07!57;CL:0000071!1.59e-07!18;CL:0002546!1.59e-07!18;CL:0002575!2.40e-07!2;CL:0000066!9.08e-07!254 | |ontology_enrichment_celltype=CL:0000115!3.15e-12!35;CL:0002139!5.03e-11!24;CL:0000064!2.28e-09!3;CL:0005012!2.28e-09!3;CL:0000067!2.28e-09!3;CL:0002304!2.28e-09!3;CL:0002078!4.15e-09!44;CL:0000213!1.48e-07!57;CL:0000215!1.48e-07!57;CL:0000071!1.59e-07!18;CL:0002546!1.59e-07!18;CL:0002575!2.40e-07!2;CL:0000066!9.08e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.24e-14;1!CL:0000164;6.24e-14;1!CL:0000502;6.24e-14;1!CL:0000172;6.24e-14;1!CL:0000173;6.24e-14;1!CL:0002262;1.93e-07;2!CL:1000398;1.93e-07;2!CL:0002575;1.93e-07;2 | |ontology_enrichment_celltype_v019=CL:0000167;6.24e-14;1!CL:0000164;6.24e-14;1!CL:0000502;6.24e-14;1!CL:0000172;6.24e-14;1!CL:0000173;6.24e-14;1!CL:0002262;1.93e-07;2!CL:1000398;1.93e-07;2!CL:0002575;1.93e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.85e-14,1;CL:0000164,5.85e-14,1;CL:0000502,5.85e-14,1;CL:0000172,5.85e-14,1;CL:0000173,5.85e-14,1;CL:0002351,5.85e-14,1;CL:0002575,1.54e-07,2;CL:0002262,1.87e-07,2;CL:1000398,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002351;6.24e-14;1 | |ontology_enrichment_development_v019=CL:0002351;6.24e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;6.24e-14;1!DOID:0050619;1.33e-13;1!DOID:1357;1.33e-13;1!DOID:1325;3.51e-08;7!DOID:3904;3.51e-08;7!DOID:3910;1.05e-07;2!DOID:0050615;1.26e-07;16 | |ontology_enrichment_disease_v019=DOID:4430;6.24e-14;1!DOID:0050619;1.33e-13;1!DOID:1357;1.33e-13;1!DOID:1325;3.51e-08;7!DOID:3904;3.51e-08;7!DOID:3910;1.05e-07;2!DOID:0050615;1.26e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,5.85e-14,1;DOID:0050619,1.83e-13,1;DOID:1357,1.83e-13,1;DOID:1325,3.45e-08,7;DOID:3904,3.45e-08,7;DOID:3910,9.87e-08,2;DOID:0050615,1.32e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0002200!2.36e-12!11;UBERON:0006876!2.36e-12!11;UBERON:0000488!7.05e-12!4;UBERON:0001778!2.28e-09!3;UBERON:0001775!2.28e-09!3;UBERON:0002049!4.53e-08!79;UBERON:0007798!4.53e-08!79;UBERON:0002203!6.19e-08!6;UBERON:0001768!6.19e-08!6;UBERON:0000487!7.32e-08!22;UBERON:0001986!1.59e-07!18;UBERON:0004638!1.59e-07!18;UBERON:0004852!1.59e-07!18;UBERON:0006914!9.43e-07!25 | |ontology_enrichment_uberon=UBERON:0002200!2.36e-12!11;UBERON:0006876!2.36e-12!11;UBERON:0000488!7.05e-12!4;UBERON:0001778!2.28e-09!3;UBERON:0001775!2.28e-09!3;UBERON:0002049!4.53e-08!79;UBERON:0007798!4.53e-08!79;UBERON:0002203!6.19e-08!6;UBERON:0001768!6.19e-08!6;UBERON:0000487!7.32e-08!22;UBERON:0001986!1.59e-07!18;UBERON:0004638!1.59e-07!18;UBERON:0004852!1.59e-07!18;UBERON:0006914!9.43e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.33e-13;1!UBERON:0001825;1.33e-13;1!UBERON:0004903;1.05e-07;2!UBERON:0002173;1.05e-07;2!UBERON:0002186;1.05e-07;2!UBERON:0001281;1.93e-07;2!UBERON:0003497;1.93e-07;2!UBERON:0003909;1.93e-07;2!UBERON:0003835;1.93e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001764;1.33e-13;1!UBERON:0001825;1.33e-13;1!UBERON:0004903;1.05e-07;2!UBERON:0002173;1.05e-07;2!UBERON:0002186;1.05e-07;2!UBERON:0001281;1.93e-07;2!UBERON:0003497;1.93e-07;2!UBERON:0003909;1.93e-07;2!UBERON:0003835;1.93e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.83e-13,1;UBERON:0001825,1.83e-13,1;UBERON:0004903,9.87e-08,2;UBERON:0002173,9.87e-08,2;UBERON:0002186,9.87e-08,2;UBERON:0001281,1.87e-07,2;UBERON:0003497,1.87e-07,2;UBERON:0003909,1.87e-07,2;UBERON:0003835,1.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,1.52054421143703,0.976248230192678,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.866198686566443,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0.285826432630578,0.448524337381443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76221041716467,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96685908293468,0,0,0,0,0,0,0,5.91151142758382,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.661983911750998,0,1.19472429772959,2.84609546029793,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,1.22313785466253,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38206111360616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0.327872630709804,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56636834063345,0,0,5.64380755633827,0,2.82811856521951,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,1.52054421143703,0.976248230192678,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.908144565869588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.866198686566443,0,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,0,0,0.285826432630578,0.448524337381443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76221041716467,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96685908293468,0,0,0,0,0,0,0,5.91151142758382,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.661983911750998,0,1.19472429772959,2.84609546029793,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,1.22313785466253,0.523014231561666,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38206111360616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0.327872630709804,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09642024789354,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56636834063345,0,0,5.64380755633827,0,2.82811856521951,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:94535907..94535920,+ | |short_description=p@chr1:94535907..94535920,+ | ||
}} | }} |
Latest revision as of 11:30, 28 July 2015
Short description: | p@chr1:94535907..94535920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94535907..94535920, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.85e-14 | 1 |
enteroendocrine cell | 5.85e-14 | 1 |
type D enteroendocrine cell | 5.85e-14 | 1 |
somatostatin secreting cell | 5.85e-14 | 1 |
pancreatic D cell | 5.85e-14 | 1 |
progenitor cell of endocrine pancreas | 5.85e-14 | 1 |
central nervous system pericyte | 1.54e-07 | 2 |
endothelial cell of sinusoid | 1.87e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.83e-13 | 1 |
paranasal sinus | 1.83e-13 | 1 |
bronchoalveolar duct junction | 9.87e-08 | 2 |
alveolar duct | 9.87e-08 | 2 |
bronchiole | 9.87e-08 | 2 |
hepatic sinusoid | 1.87e-07 | 2 |
abdomen blood vessel | 1.87e-07 | 2 |
sinusoid | 1.87e-07 | 2 |
abdominal segment blood vessel | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.85e-14 | 1 |
paranasal sinus cancer | 1.83e-13 | 1 |
maxillary sinus cancer | 1.83e-13 | 1 |
bronchus cancer | 3.45e-08 | 7 |
bronchogenic carcinoma | 3.45e-08 | 7 |
lung adenocarcinoma | 9.87e-08 | 2 |
respiratory system cancer | 1.32e-07 | 16 |