FFCP PHASE1:Hg19::chr1:94344048..94344055,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94344048..94344055,- | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr1:94344048..94344055,- | |description=CAGE_peak_at_chr1:94344048..94344055,- | ||
|id=chr1:94344048..94344055,- | |id=chr1:94344048..94344055,- | ||
|ontology_enrichment_celltype=CL:0002057!4.24e-56!42;CL:0000860!4.99e-52!45;CL:0002009!2.58e-37!65;CL:0000557!6.26e-37!71;CL:0002194!4.20e-35!63;CL:0000576!4.20e-35!63;CL:0000040!4.20e-35!63;CL:0000559!4.20e-35!63;CL:0000839!3.37e-34!70;CL:0000766!3.97e-34!76;CL:0000763!1.15e-23!112;CL:0000049!1.15e-23!112;CL:0000738!2.42e-21!140;CL:0002031!8.18e-21!124;CL:0002087!5.69e-20!119;CL:0000037!2.63e-16!172;CL:0000566!2.63e-16!172;CL:0002032!9.78e-16!165;CL:0000837!9.78e-16!165;CL:0000988!4.29e-15!182 | |ontology_enrichment_celltype=CL:0002057!4.24e-56!42;CL:0000860!4.99e-52!45;CL:0002009!2.58e-37!65;CL:0000557!6.26e-37!71;CL:0002194!4.20e-35!63;CL:0000576!4.20e-35!63;CL:0000040!4.20e-35!63;CL:0000559!4.20e-35!63;CL:0000839!3.37e-34!70;CL:0000766!3.97e-34!76;CL:0000763!1.15e-23!112;CL:0000049!1.15e-23!112;CL:0000738!2.42e-21!140;CL:0002031!8.18e-21!124;CL:0002087!5.69e-20!119;CL:0000037!2.63e-16!172;CL:0000566!2.63e-16!172;CL:0002032!9.78e-16!165;CL:0000837!9.78e-16!165;CL:0000988!4.29e-15!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.91e-55;33!CL:0002057;1.91e-55;33!CL:0000473;5.46e-36;39!CL:0000234;5.46e-36;39!CL:0000576;2.47e-26;48!CL:0000766;3.02e-14;69!CL:0000763;6.02e-09;100!CL:0002087;7.11e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.15e-46,42;CL:0002057,1.15e-46,42;CL:0000473,9.28e-41,48;CL:0000234,9.28e-41,48;CL:0002194,1.75e-32,59;CL:0000576,1.75e-32,59;CL:0000040,1.75e-32,59;CL:0000559,1.75e-32,59;CL:0002009,2.05e-31,61;CL:0000839,5.09e-29,66;CL:0000557,1.39e-28,67;CL:0000766,1.41e-26,72;CL:0000763,1.50e-17,108;CL:0000049,1.50e-17,108;CL:0002087,1.92e-16,115;CL:0002031,9.94e-16,120;CL:0000738,8.59e-14,136;CL:0002032,1.59e-11,161;CL:0000837,1.59e-11,161;CL:0000037,5.20e-11,168;CL:0000988,2.09e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.72e-37;42!CL:0000049;2.08e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.14e-32!80;UBERON:0001474!1.23e-29!86;UBERON:0002390!1.65e-26!102;UBERON:0003061!1.65e-26!102;UBERON:0004765!1.73e-24!101;UBERON:0001434!1.73e-24!101;UBERON:0002193!1.14e-23!112;UBERON:0002405!6.95e-21!115;UBERON:0002204!8.99e-13!167;UBERON:0003081!9.44e-11!216 | |ontology_enrichment_uberon=UBERON:0002371!3.14e-32!80;UBERON:0001474!1.23e-29!86;UBERON:0002390!1.65e-26!102;UBERON:0003061!1.65e-26!102;UBERON:0004765!1.73e-24!101;UBERON:0001434!1.73e-24!101;UBERON:0002193!1.14e-23!112;UBERON:0002405!6.95e-21!115;UBERON:0002204!8.99e-13!167;UBERON:0003081!9.44e-11!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-25,76;UBERON:0001474,2.73e-23,82;UBERON:0004765,3.55e-21,90;UBERON:0002405,1.78e-20,93;UBERON:0002390,2.10e-19,98;UBERON:0003061,2.10e-19,98;UBERON:0001434,5.28e-19,100;UBERON:0002193,1.50e-17,108;UBERON:0002204,4.42e-11,167;UBERON:0003081,5.90e-09,203 | |||
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|short_description=p@chr1:94344048..94344055,- | |short_description=p@chr1:94344048..94344055,- | ||
}} | }} |
Latest revision as of 11:28, 28 July 2015
Short description: | p@chr1:94344048..94344055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94344048..94344055, - |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.15e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-46 | 42 |
defensive cell | 9.28e-41 | 48 |
phagocyte | 9.28e-41 | 48 |
monopoietic cell | 1.75e-32 | 59 |
monocyte | 1.75e-32 | 59 |
monoblast | 1.75e-32 | 59 |
promonocyte | 1.75e-32 | 59 |
macrophage dendritic cell progenitor | 2.05e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.09e-29 | 66 |
granulocyte monocyte progenitor cell | 1.39e-28 | 67 |
myeloid leukocyte | 1.41e-26 | 72 |
myeloid cell | 1.50e-17 | 108 |
common myeloid progenitor | 1.50e-17 | 108 |
nongranular leukocyte | 1.92e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.94e-16 | 120 |
leukocyte | 8.59e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-11 | 161 |
hematopoietic stem cell | 5.20e-11 | 168 |
hematopoietic cell | 2.09e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-25 | 76 |
bone element | 2.73e-23 | 82 |
skeletal element | 3.55e-21 | 90 |
immune system | 1.78e-20 | 93 |
hematopoietic system | 2.10e-19 | 98 |
blood island | 2.10e-19 | 98 |
skeletal system | 5.28e-19 | 100 |
hemolymphoid system | 1.50e-17 | 108 |
musculoskeletal system | 4.42e-11 | 167 |
lateral plate mesoderm | 5.90e-09 | 203 |