FFCP PHASE1:Hg19::chr1:86048263..86048315,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:86048263..86048315,-
|short_description=p@chr1:86048263..86048315,-
|description=CAGE_peak_at_chr1:86048263..86048315,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:86048263..86048315,- | |||
|coexpression_cluster_id=C4002 | |||
|description=CAGE_peak_at_chr1:86048263..86048315,- | |||
|id=chr1:86048263..86048315,- | |||
|ontology_enrichment_celltype=CL:0000055!3.61e-26!180;CL:0000222!5.85e-26!119;CL:0000548!8.88e-21!679;CL:0000004!8.88e-21!679;CL:0000255!8.88e-21!679;CL:0000012!4.76e-20!682;CL:0000220!5.69e-19!246;CL:0002321!6.55e-19!248;CL:0000144!1.91e-16!625;CL:0000680!5.99e-15!57;CL:0000056!5.99e-15!57;CL:0000355!5.99e-15!57;CL:0000183!1.04e-14!59;CL:0000187!1.84e-14!54;CL:0000192!3.85e-14!42;CL:0000514!3.85e-14!42;CL:0000057!5.28e-14!75;CL:0000393!9.47e-14!60;CL:0000211!9.47e-14!60;CL:0002371!1.12e-13!591;CL:0000003!1.40e-11!722;CL:0000213!8.27e-11!57;CL:0000215!8.27e-11!57;CL:0000359!2.17e-10!32;CL:0002078!1.64e-08!44;CL:0000066!6.26e-08!254;CL:0002620!2.93e-07!23;CL:1000449!5.20e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000134;5.15e-10;55!CL:0000359;5.64e-10;32!CL:0000192;7.61e-10;43!CL:0000723;6.16e-09;61!CL:0000048;1.32e-08;58!CL:1000449;4.56e-08;15!CL:0000187;2.13e-07;55!CL:0002620;5.04e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.60e-22,121;CL:0000192,1.77e-14,43;CL:0000514,1.77e-14,43;CL:0000680,5.61e-13,58;CL:0000056,5.61e-13,58;CL:0000355,5.61e-13,58;CL:0000187,1.31e-12,55;CL:0000048,4.79e-12,427;CL:0000057,1.11e-11,76;CL:0000723,2.54e-11,433;CL:0002321,3.03e-11,250;CL:0000393,3.83e-11,61;CL:0000211,3.83e-11,61;CL:0000359,1.15e-10,32;CL:0000034,2.12e-10,441;CL:0000213,4.16e-09,58;CL:0000215,4.16e-09,58;CL:0002078,1.74e-08,45;CL:1000449,9.37e-08,15;CL:0002620,6.08e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;7.61e-10;43!CL:0000222;9.21e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.90e-23!143;UBERON:0003914!1.03e-20!118;UBERON:0002100!1.41e-19!216;UBERON:0000486!3.59e-19!82;UBERON:0000490!1.01e-17!138;UBERON:0000914!1.02e-17!83;UBERON:0002329!1.02e-17!83;UBERON:0003077!1.02e-17!83;UBERON:0003059!1.02e-17!83;UBERON:0007282!1.02e-17!83;UBERON:0009618!1.02e-17!83;UBERON:0007285!1.02e-17!83;UBERON:0004290!8.50e-17!70;UBERON:0002049!7.18e-16!79;UBERON:0007798!7.18e-16!79;UBERON:0000055!1.52e-15!69;UBERON:0004872!4.72e-15!84;UBERON:0001134!9.41e-14!61;UBERON:0002036!9.41e-14!61;UBERON:0003082!9.41e-14!61;UBERON:0002385!1.14e-13!63;UBERON:0001015!1.14e-13!63;UBERON:0000383!1.14e-13!63;UBERON:0001981!1.37e-13!60;UBERON:0007500!1.37e-13!60;UBERON:0004537!1.37e-13!60;UBERON:0006965!1.37e-13!60;UBERON:0000119!2.04e-13!312;UBERON:0000483!4.86e-13!309;UBERON:0003104!5.53e-13!238;UBERON:0009142!5.53e-13!238;UBERON:0001637!1.17e-12!42;UBERON:0003509!1.17e-12!42;UBERON:0004572!1.17e-12!42;UBERON:0004535!3.11e-11!110;UBERON:0001009!3.30e-10!113;UBERON:0009569!9.40e-10!113;UBERON:0004923!1.29e-09!57;UBERON:0000475!2.12e-09!365;UBERON:0004573!2.98e-09!33;UBERON:0004571!2.98e-09!33;UBERON:0000926!1.93e-08!448;UBERON:0004120!1.93e-08!448;UBERON:0006603!1.93e-08!448;UBERON:0000468!2.39e-08!659;UBERON:0000477!4.73e-08!286;UBERON:0000353!6.11e-08!17;UBERON:0000058!1.33e-07!26;UBERON:0004876!1.34e-07!20;UBERON:0000481!1.83e-07!347;UBERON:0006555!4.05e-07!17;UBERON:0005103!4.05e-07!17;UBERON:0000083!4.05e-07!17;UBERON:0009201!4.05e-07!17;UBERON:0004819!4.05e-07!17;UBERON:0006553!4.05e-07!17;UBERON:0003074!4.05e-07!17;UBERON:0003060!4.05e-07!17;UBERON:0000080!5.04e-07!18;UBERON:0002120!5.04e-07!18;UBERON:0004875!5.04e-07!18;UBERON:0005721!5.04e-07!18;UBERON:0005754!5.04e-07!18;UBERON:0007297!5.04e-07!18;UBERON:0004211!5.20e-07!16;UBERON:0001285!5.20e-07!16;UBERON:0007684!5.20e-07!16;UBERON:0003220!5.20e-07!16;UBERON:0004208!5.20e-07!16;UBERON:0000467!7.26e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.60e-09;74!UBERON:0002049;1.09e-08;75!UBERON:0007798;1.09e-08;75!UBERON:0000353;1.32e-08;15!UBERON:0001637;2.35e-08;42!UBERON:0003509;2.35e-08;42!UBERON:0004572;2.35e-08;42!UBERON:0006555;4.56e-08;15!UBERON:0004819;4.56e-08;15!UBERON:0001285;4.56e-08;15!UBERON:0007684;4.56e-08;15!UBERON:0000055;8.19e-08;65!UBERON:0007500;1.22e-07;56!UBERON:0001981;1.22e-07;56!UBERON:0004537;1.22e-07;56!UBERON:0004573;1.53e-07;33!UBERON:0004571;1.53e-07;33 | |||
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| ||
|short_description=p@chr1:86048263..86048315,- | |||
}} | }} |
Latest revision as of 10:52, 28 July 2015
Short description: | p@chr1:86048263..86048315, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86048263..86048315, - |
Coexpression cluster: | C4002_Smooth_Fibroblast_Renal_Hair_spindle_Alveolar_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.60e-22 | 121 |
smooth muscle cell | 1.77e-14 | 43 |
smooth muscle myoblast | 1.77e-14 | 43 |
muscle precursor cell | 5.61e-13 | 58 |
myoblast | 5.61e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.61e-13 | 58 |
muscle cell | 1.31e-12 | 55 |
multi fate stem cell | 4.79e-12 | 427 |
fibroblast | 1.11e-11 | 76 |
somatic stem cell | 2.54e-11 | 433 |
embryonic cell | 3.03e-11 | 250 |
electrically responsive cell | 3.83e-11 | 61 |
electrically active cell | 3.83e-11 | 61 |
vascular associated smooth muscle cell | 1.15e-10 | 32 |
stem cell | 2.12e-10 | 441 |
lining cell | 4.16e-09 | 58 |
barrier cell | 4.16e-09 | 58 |
meso-epithelial cell | 1.74e-08 | 45 |
epithelial cell of nephron | 9.37e-08 | 15 |
skin fibroblast | 6.08e-07 | 23 |