FFCP PHASE1:Hg19::chr1:859294..859314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:859294..859314,+ | |||
|coexpression_cluster_id=C2602 | |coexpression_cluster_id=C2602 | ||
|description=CAGE_peak_at_chr1:859294..859314,+ | |description=CAGE_peak_at_chr1:859294..859314,+ | ||
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|ontology_enrichment_celltype=CL:0000055!1.40e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.40e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,9.71e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.09e-09!90;UBERON:0005743!2.37e-08!86;UBERON:0000073!3.28e-08!94;UBERON:0001016!3.28e-08!94;UBERON:0003075!1.63e-07!86;UBERON:0007284!1.63e-07!86;UBERON:0000475!2.99e-07!365;UBERON:0001017!5.84e-07!82;UBERON:0007625!6.69e-07!11;UBERON:0004457!7.11e-07!12;UBERON:0000042!7.11e-07!12 | |ontology_enrichment_uberon=UBERON:0002346!7.09e-09!90;UBERON:0005743!2.37e-08!86;UBERON:0000073!3.28e-08!94;UBERON:0001016!3.28e-08!94;UBERON:0003075!1.63e-07!86;UBERON:0007284!1.63e-07!86;UBERON:0000475!2.99e-07!365;UBERON:0001017!5.84e-07!82;UBERON:0007625!6.69e-07!11;UBERON:0004457!7.11e-07!12;UBERON:0000042!7.11e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.24e-09;9!UBERON:0000042;1.24e-09;9!UBERON:0007625;3.22e-09;11!UBERON:0000310;1.23e-08;10!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6!UBERON:0001443;1.35e-07;11!UBERON:0000970;8.71e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0004457;1.24e-09;9!UBERON:0000042;1.24e-09;9!UBERON:0007625;3.22e-09;11!UBERON:0000310;1.23e-08;10!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6!UBERON:0001443;1.35e-07;11!UBERON:0000970;8.71e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.66e-09,12;UBERON:0000042,1.66e-09,12;UBERON:0007625,3.46e-09,11;UBERON:0000310,1.14e-08,10;UBERON:0003688,1.18e-07,6;UBERON:0002358,1.18e-07,6;UBERON:0003684,1.18e-07,6;UBERON:0001178,1.18e-07,6;UBERON:0001443,1.26e-07,11 | |||
|phase1_expression=18.8945514441379,10.7050261945492,13.6725771973092,6.00439790118782,7.15137751083661,9.59572376510406,2.53299878168311,0,0,2.7030733015166,0,0,0,0.123766352960047,0,0,0,0,0,3.93987385845721,6.73202281106035,3.13454721478088,0,0.547497700291537,0.87879847716362,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,3.2529523714611,3.50936537445123,10.8634889220618,0,3.40644409211845,6.90104165297695,5.09977614163897,4.91874799881506,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,1.68203280042692,0,0,0.933633106199299,0,0.817309515567294,0.756787138224657,15.55674996096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0.612975591598039,0.150238058906597,0.113432183160021,13.6336123123535,0.213557388818567,0.211931901159562,23.4071054945834,0.92747276314595,8.75977836155139,5.95573940261087,38.3122274187674,12.6668106709558,13.6314238091822,0.920498986422993,0.323292113637624,17.0404604407975,8.86618464403234,14.0735291617705,0,0,0,0.243947412259191,0,0.348581828608555,1.7622379352613,0.504641701751257,0,0,3.85944562915731,1.38134921352481,0,0,1.53798840051797,2.02301628093722,2.89213235860178,2.20587945464788,2.61455332910887,1.42362371466658,1.61797569792197,2.15843611637881,0,0,0,0,4.41026134156626,0,0,0,0,0,3.43135620597051,0,0,0,0,0,0,1.44331342025273,3.13012093432707,1.76113041353732,0,0,0,7.90204397959275,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3596006883328,0.36669142910475,0.775630294546667,0,0,1.86156681609409,1.04007436911366,4.8869401109807,0,4.26275486425759,1.00084595560703,2.17048642156577,1.64648067356154,0,2.13235169245527,1.58390374586686,1.80863626235752,0.871533458600294,3.69900067373611,0,0,0,0,0,2.85273810081437,1.30303176000821,4.10952645100767,5.19276793395697,0,0,0,0,1.77866236955724,1.30139853857622,7.73288812777695,1.00509759200609,4.46557126157214,0,0,0,0.12269149171914,1.50051156317903,0,1.87173775377726,0.713715955188647,1.10391690523754,0,0.300946099727719,0,0,2.65690239414175,2.39679919104214,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,9.6762045049323,17.9550508747033,12.6297042494883,10.6355493882232,11.7692667285342,12.5466058492014,10.3892646511494,0.308419387605311,2.13074070375753,0.328508624055237,0,1.85936605535935,0,0,0,0.803701137152247,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,9.25363516141736,5.96082162596476,1.00337954770971,0,0,0.223874754722178,0,0,2.05160100093111,13.4486004736879,4.55529752530024,1.13345112812495,9.24851594665268,7.92091199237645,0,0,0,0.870036464629098,0.924291702687866,2.6095624703442,0,0.966782203814463,1.0151168573996,0.93749290157711,2.31483292681517,0,0,0,0,0.929691098594572,1.25924938732256,1.3940745403212,0,0,0,0,0,0,0,0.38126038784765,0,0,0.318203247925937,0,0,0.54907405947211,1.17812402345686,0,0,0,1.95053495635836,0,1.05650146756755,0,1.69686518344455,1.13008116620243,18.7464216805682,0.66343897524122,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,3.37772216476263,1.97576935775941,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,5.34120355637366,0.962479855263359,0,0,0,0,1.27541018183058,0.399158742865633,0.191505370132367,0.211673582723883,1.62310970137278,0.280797178113459,0,0,10.0253790836027,0.677167111206413,0,0,0.851692475380653,0.343505344755765,2.45792611446766,0.447352215784832,2.83643540910244,0.390776190804081,0.835218521685727,0,0,0,0,0,0.146508179271894,0.849523652246594,0,0,0,0,0,0,0.703347082052564,0,0,0,1.79323189425963,0.828851746593443,2.26739473068848,0.613612095012929,0,0,0,0.895105873378046,0,1.08507746200627,0,0,0,0.185536196323703,0,1.5625665665114,7.34663999968044,0,0.341380344856499,1.01701460117107,1.65471377237555,1.03423011972439,1.74962768029953,1.73624994933292,0.885741385813839,0.482385754501632,0,0.663475559587348,0.591095237907095,0.658156191461918,1.85195387982283,2.09135616417905,1.00035336054936,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0.470940769185074,0,0.451191321234361,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0.176915129006678,3.05515072466813,0,0.370691816839509,0,1.21322039365219,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,4.83962864194656,0.30607276163049,3.1593289814244,2.1045278718029,4.45859223008163,0,0,0,0,0.284609546029793,1.24807205711825,0,0.0979923974143777,0.0870592065804026,1.57254001417827,0,6.57943052765779,10.232504392066,6.15865927899069,0.969890164884194,0.0882561266915003,3.84167259326905,0,0.19871461170299,0,1.56441106187842,0.0801588202515337,1.28071796843612,14.1864822803312,0.288180834308212,0,0,0,0.869767748958028,4.9495747269527,1.49494626680975,1.8828512336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| ||
|short_description=p@chr1:859294..859314,+ | |short_description=p@chr1:859294..859314,+ | ||
}} | }} |
Latest revision as of 10:49, 28 July 2015
Short description: | p@chr1:859294..859314, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:859294..859314, + |
Coexpression cluster: | C2602_Fibroblast_merkel_neuroectodermal_neuroepithelioma_Retinal_Preadipocyte_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 9.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.66e-09 | 12 |
serous membrane | 1.66e-09 | 12 |
pigment epithelium of eye | 3.46e-09 | 11 |
breast | 1.14e-08 | 10 |
omentum | 1.18e-07 | 6 |
peritoneum | 1.18e-07 | 6 |
abdominal cavity | 1.18e-07 | 6 |
visceral peritoneum | 1.18e-07 | 6 |
chest | 1.26e-07 | 11 |