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FFCP PHASE1:Hg19::chr1:8484953..8484970,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=473
|EntrezGene=entrezgene:473
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=9965
|HGNC=HGNC:9965
|TSSclassifier=not
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=301bp_to_ENST00000488215_5end
|association_with_transcript=301bp_to_ENST00000488215_5end
|cluster_id=chr1:8484953..8484970,-
|coexpression_cluster_id=C20
|coexpression_cluster_id=C20
|description=CAGE_peak_43_at_RERE_5end
|description=CAGE_peak_43_at_RERE_5end

Revision as of 10:44, 28 July 2015

Short description:p43@RERE
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_43_at_RERE_5end
Coexpression cluster:C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat
Association with transcript: 301bp_to_ENST00000488215_5end
EntrezGene:473
HGNC: 9965
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data