FFCP PHASE1:Hg19::chr1:83982415..83982420,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:83982415..83982420,+ | |||
|description=CAGE_peak_at_chr1:83982415..83982420,+ | |||
|id=chr1:83982415..83982420,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.25e-25!75;CL:0002556!8.64e-19!6;CL:0002552!7.74e-17!5;CL:0002620!1.72e-16!23;CL:0000055!8.95e-13!180 | |||
|ontology_enrichment_celltype_v019=CL:0002552;7.87e-38;5!CL:0002556;3.32e-18;6!CL:0002574;3.33e-13;1!CL:0000057;1.71e-08;73!CL:1000487;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,5.92e-38,5;CL:0002556,3.96e-18,6;CL:0000057,4.01e-14,76;CL:0002574,3.33e-13,1;CL:1000487,4.98e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.06e-28!95;UBERON:0000165!4.25e-19!28;UBERON:0000930!4.25e-19!28;UBERON:0001758!8.64e-19!6;UBERON:0003672!8.64e-19!6;UBERON:0002097!1.35e-13!40;UBERON:0002199!2.29e-13!45;UBERON:0002416!2.29e-13!45;UBERON:0001444!7.14e-13!48;UBERON:0000078!1.99e-12!18;UBERON:0000475!1.16e-11!365;UBERON:0000075!7.42e-11!13;UBERON:0005944!7.42e-11!13;UBERON:0004288!7.42e-11!13;UBERON:0003089!7.42e-11!13;UBERON:0001828!2.34e-10!8;UBERON:0003129!6.70e-10!11;UBERON:0000166!1.75e-08!21;UBERON:0000161!1.78e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;8.40e-24;8!UBERON:0000165;5.97e-20;28!UBERON:0001758;3.32e-18;6!UBERON:0003672;3.32e-18;6!UBERON:0003129;1.07e-15;7!UBERON:0003729;8.98e-15;13!UBERON:0007029;7.24e-13;1!UBERON:0001444;7.11e-11;48!UBERON:0011137;3.34e-10;11!UBERON:0010323;3.34e-10;11!UBERON:0000161;3.47e-10;19!UBERON:0000166;3.47e-10;19!UBERON:0000344;1.09e-09;20!UBERON:0000033;1.54e-09;50!UBERON:0007811;1.60e-08;52!UBERON:0000075;3.57e-07;16!UBERON:0001555;5.99e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,7.04e-24,8;UBERON:0000165,3.04e-19,29;UBERON:0000930,3.04e-19,29;UBERON:0001758,3.96e-18,6;UBERON:0003672,3.96e-18,6;UBERON:0003129,1.24e-15,7;UBERON:0003102,2.33e-15,99;UBERON:0003729,8.07e-15,13;UBERON:0007029,6.82e-13,1;UBERON:0001444,3.75e-11,49;UBERON:0010323,3.67e-10,11;UBERON:0000344,1.02e-09,20;UBERON:0000033,1.11e-09,56;UBERON:0000166,7.49e-09,22;UBERON:0000153,1.11e-08,62;UBERON:0007811,1.11e-08,62;UBERON:0011137,4.27e-08,14;UBERON:0000161,4.29e-08,36;UBERON:0000075,3.81e-07,16 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0,4.49139176760765,1.84251475967652,2.78979609174567,4.75201142912821,0.989067717114227,0,0,2.35670559535693,1.12606667884768,4.71008996323111,0.438977620880838,0.919463387397059,0.150238058906597,0,0,0.85422955527427,0.423863802319124,0,0,0.772921620136887,1.8611685633159,0,0,0.252433774244115,1.56484827691909,1.45481451136931,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,3.0409265063829,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0,0,0.154209693802656,0,0.410635780069046,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,1.22849920267187,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52340189153347,7.21759639555099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0.435433495793923,0.342233301085281,0.202056159043763,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:83982415..83982420,+ | |||
}} |
Latest revision as of 10:38, 28 July 2015
Short description: | p@chr1:83982415..83982420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:83982415..83982420, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 5.92e-38 | 5 |
fibroblast of periodontium | 3.96e-18 | 6 |
fibroblast | 4.01e-14 | 76 |
stromal cell of pancreas | 3.33e-13 | 1 |
smooth muscle cell of prostate | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 7.04e-24 | 8 |
mouth | 3.04e-19 | 29 |
stomodeum | 3.04e-19 | 29 |
periodontium | 3.96e-18 | 6 |
dentition | 3.96e-18 | 6 |
skull | 1.24e-15 | 7 |
surface structure | 2.33e-15 | 99 |
mouth mucosa | 8.07e-15 | 13 |
surface | 6.82e-13 | 1 |
subdivision of head | 3.75e-11 | 49 |
cranial skeletal system | 3.67e-10 | 11 |
mucosa | 1.02e-09 | 20 |
head | 1.11e-09 | 56 |
oral opening | 7.49e-09 | 22 |
anterior region of body | 1.11e-08 | 62 |
craniocervical region | 1.11e-08 | 62 |
axial skeletal system | 4.27e-08 | 14 |
orifice | 4.29e-08 | 36 |
subdivision of skeletal system | 3.81e-07 | 16 |