FFCP PHASE1:Hg19::chr1:72749085..72749096,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:72749085..72749096,+ to FFCP PHASE1:Hg19::chr1:72749085..72749096,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:72749085..72749096,+ | |||
|description=CAGE_peak_at_chr1:72749085..72749096,+ | |||
|id=chr1:72749085..72749096,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;6.74e-11;1!CL:0000557;6.74e-11;1!CL:0002393;2.77e-07;6!CL:0002569;2.77e-07;6!CL:0002397;2.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.06e-10,9;CL:0002397,3.06e-10,9;CL:0002569,2.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.74e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;6.74e-11;1!DOID:3165;6.74e-11;1!DOID:0060121;6.74e-11;1!DOID:2438;6.74e-11;1!DOID:4418;6.74e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.10e-10,1;DOID:3165,1.10e-10,1;DOID:0060121,1.10e-10,1;DOID:2438,1.10e-10,1;DOID:4418,1.10e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;6.74e-11;1!UBERON:0008811;6.74e-11;1!UBERON:0002371;1.03e-07;12!UBERON:0003422;2.77e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.53e-11,1;UBERON:0008811,2.53e-11,1;UBERON:0006258,2.53e-11,1;UBERON:0005876,2.53e-11,1;UBERON:0004874,2.53e-11,1;UBERON:0003422,2.02e-07,6 | |||
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| ||
|short_description=p@chr1:72749085..72749096,+ | |||
}} | }} |
Latest revision as of 10:16, 28 July 2015
Short description: | p@chr1:72749085..72749096, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:72749085..72749096, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.06e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.06e-10 | 9 |
mesenchymal stem cell of umbilical cord | 2.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
penis | 2.53e-11 | 1 |
intromittent organ | 2.53e-11 | 1 |
lateral plate mesenchyme | 2.53e-11 | 1 |
undifferentiated genital tubercle | 2.53e-11 | 1 |
somatopleure | 2.53e-11 | 1 |
mesenchyme of umbilical cord | 2.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.10e-10 | 1 |
skin benign neoplasm | 1.10e-10 | 1 |
integumentary system benign neoplasm | 1.10e-10 | 1 |
dermis tumor | 1.10e-10 | 1 |
cutaneous fibrous histiocytoma | 1.10e-10 | 1 |