FFCP PHASE1:Hg19::chr1:66801524..66801541,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:66801524..66801541,- | |||
|coexpression_cluster_id=C875 | |||
|description=CAGE_peak_at_chr1:66801524..66801541,- | |||
|id=chr1:66801524..66801541,- | |||
|ontology_enrichment_celltype=CL:0000738!2.24e-68!140;CL:0002087!2.47e-61!119;CL:0002031!1.09e-53!124;CL:0000037!3.34e-51!172;CL:0000566!3.34e-51!172;CL:0000988!6.44e-50!182;CL:0002057!1.24e-49!42;CL:0002032!3.95e-49!165;CL:0000837!3.95e-49!165;CL:0000860!1.75e-45!45;CL:0000766!1.81e-39!76;CL:0002009!3.00e-32!65;CL:0002194!8.62e-32!63;CL:0000576!8.62e-32!63;CL:0000040!8.62e-32!63;CL:0000559!8.62e-32!63;CL:0000557!1.71e-28!71;CL:0000839!2.01e-27!70;CL:0000763!1.71e-24!112;CL:0000049!1.71e-24!112;CL:0000838!5.02e-24!52;CL:0000542!2.18e-23!53;CL:0000051!2.18e-23!53;CL:0000791!1.76e-15!18;CL:0000789!1.76e-15!18;CL:0002420!1.76e-15!18;CL:0002419!1.76e-15!18;CL:0000790!1.76e-15!18;CL:0000236!2.76e-15!14;CL:0000134!4.19e-15!358;CL:0000094!4.58e-15!8;CL:0002320!2.21e-14!365;CL:0000219!7.28e-12!390;CL:0000084!1.30e-11!25;CL:0000827!1.30e-11!25;CL:0000624!1.83e-10!6;CL:0000081!1.95e-10!11;CL:0000034!2.29e-10!444;CL:0000945!2.46e-10!24;CL:0000826!2.46e-10!24;CL:0000048!7.51e-10!430;CL:0000723!2.03e-09!436;CL:0002393!1.00e-08!9;CL:0002397!1.00e-08!9;CL:0000625!1.84e-08!11;CL:0000080!2.51e-07!6;CL:0000775!8.35e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.33e-36;33!CL:0002057;8.33e-36;33!CL:0000236;9.55e-28;13!CL:0000576;2.95e-25;48!CL:0000473;2.85e-24;39!CL:0000234;2.85e-24;39!CL:0000094;5.15e-24;8!CL:0000766;4.11e-20;69!CL:0002087;1.19e-19;104!CL:0000081;4.62e-17;11!CL:0002393;9.16e-17;6!CL:0002397;9.16e-17;6!CL:0000542;1.06e-14;53!CL:0000945;7.63e-14;24!CL:0000738;9.28e-14;136!CL:0000624;2.98e-12;6!CL:0000775;2.49e-10;3!CL:0000763;4.53e-10;100!CL:0000226;6.18e-10;3!CL:0000842;6.18e-10;3!CL:0000898;6.47e-10;3!CL:0000988;1.22e-09;177!CL:0000767;3.28e-09;3!CL:0000791;3.87e-09;18!CL:0000789;3.87e-09;18!CL:0002419;3.87e-09;18!CL:0000219;5.60e-08;193!CL:0000771;6.16e-08;2!CL:0000815;1.75e-07;2!CL:0000792;1.75e-07;2!CL:0002677;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.33e-67,136;CL:0002087,9.19e-59,115;CL:0000037,3.11e-52,168;CL:0000988,6.62e-49,177;CL:0000860,7.23e-49,42;CL:0002057,7.23e-49,42;CL:0002032,1.47e-48,161;CL:0000837,1.47e-48,161;CL:0002031,1.90e-48,120;CL:0000766,9.86e-45,72;CL:0000473,8.68e-42,48;CL:0000234,8.68e-42,48;CL:0002194,6.84e-32,59;CL:0000576,6.84e-32,59;CL:0000040,6.84e-32,59;CL:0000559,6.84e-32,59;CL:0002009,1.29e-30,61;CL:0000839,9.17e-28,66;CL:0000557,3.03e-27,67;CL:0000763,9.02e-27,108;CL:0000049,9.02e-27,108;CL:0000236,1.76e-25,14;CL:0000094,2.90e-24,8;CL:0000838,2.34e-20,52;CL:0000542,7.21e-20,53;CL:0000051,7.21e-20,53;CL:0000134,1.05e-17,354;CL:0000081,3.08e-17,11;CL:0002320,4.24e-17,361;CL:0000219,5.83e-15,386;CL:0000945,8.62e-14,24;CL:0000826,8.62e-14,24;CL:0000048,2.38e-12,427;CL:0000624,2.99e-12,6;CL:0000034,3.04e-12,441;CL:0000723,5.46e-12,433;CL:0002393,7.34e-11,9;CL:0002397,7.34e-11,9;CL:0000775,2.21e-10,3;CL:0000226,5.57e-10,3;CL:0000842,5.57e-10,3;CL:0000898,8.02e-10,3;CL:0000767,2.15e-09,3;CL:0000791,4.00e-09,18;CL:0000789,4.00e-09,18;CL:0002420,4.00e-09,18;CL:0002419,4.00e-09,18;CL:0000790,4.00e-09,18;CL:0000771,6.07e-08,2;CL:0000815,1.81e-07,2;CL:0000792,1.81e-07,2;CL:0002677,1.81e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-33;42!CL:0000051;1.06e-14;53!CL:0000790;3.87e-09;18!CL:0000049;1.01e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.36e-30!102;UBERON:0003061!5.36e-30!102;UBERON:0002193!2.27e-28!112;UBERON:0002371!6.27e-24!80;UBERON:0001474!1.98e-21!86;UBERON:0002405!1.19e-17!115;UBERON:0004765!1.61e-16!101;UBERON:0001434!1.61e-16!101;UBERON:0002384!2.11e-13!375;UBERON:0003081!1.32e-10!216;UBERON:0002204!6.68e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.51e-23,76;UBERON:0002390,1.20e-22,98;UBERON:0003061,1.20e-22,98;UBERON:0001474,5.73e-21,82;UBERON:0002193,8.45e-20,108;UBERON:0002405,4.00e-19,93;UBERON:0004765,1.77e-18,90;UBERON:0002384,2.86e-16,371;UBERON:0001434,6.24e-16,100;UBERON:0003081,5.65e-07,203;UBERON:0002204,6.65e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.96682138424452,2.68680578668049,1.39334510984468,0,0,0,0.0774672005803016,0,0,6.09394949385065,1.40381113229099,1.08505435357926,0,0,0,0,0.377875943688809,0,0.929716147622738,0.411167888021826,0.929119112685311,4.02769349251011,5.89169625016932,14.4254160232037,1.72372840368309,1.93645405075148,6.77132432971709,0.376484679085209,0.818718450173537,1.12361742222542,7.65209730927256,6.09765151444578,7.67204550958849,0,2.59302754908121,2.55734850319616,4.64334781805734,1.13477044938228,4.9825779919646,1.00499466102697,1.0429658368404,8.03598725408932,1.81619850790011,4.41933163185078,7.59509729858123,1.05627643155971,1.4882300997553,1.67726916406701,0.44931452458598,0.750884464207532,1.92870704036496,0,0.19891667719909,0,7.03984977845291,3.82297027883492,8.00558328477199,1.28019066769952,6.4063357925762,9.19603903927173,6.61044872784862,8.58648379081828,7.39976859842283,2.34894875748376,3.82273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.196709770113833,1.96505381374582,1.23360899399706,0.334372990781356,5.21475626613745,5.20792586308207,3.89653456815823,1.6711568532776,6.18672405697158,2.65840673500345,4.06205795647523,0.25618263945135,0.390178042679635,0.328875809207352,0,0,0.741432815810302,1.60524496853828,0,0,1.14966148080576,1.03088233644789,0.759059076058509,0.318565414324097,1.30216690771284,0.950452044448374,0.301150238155546,0,0,0.947109008176067,0,2.21767417547206,1.60464117470104,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0,0,0,0,9.22462922052443,23.2668158488995,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,1.2937654491571,0.256686072559497,0,0,0,0,0,5.24304916763028,2.99161459204025,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,4.34212854858063,4.96142661882819,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370691816839509,0.313265848516366,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:66801524..66801541,- | |||
}} |
Latest revision as of 09:57, 28 July 2015
Short description: | p@chr1:66801524..66801541, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:66801524..66801541, - |
Coexpression cluster: | C875_Eosinophils_Neutrophils_Mast_CD19_CD14_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.51e-23 | 76 |
hematopoietic system | 1.20e-22 | 98 |
blood island | 1.20e-22 | 98 |
bone element | 5.73e-21 | 82 |
hemolymphoid system | 8.45e-20 | 108 |
immune system | 4.00e-19 | 93 |
skeletal element | 1.77e-18 | 90 |
connective tissue | 2.86e-16 | 371 |
skeletal system | 6.24e-16 | 100 |
lateral plate mesoderm | 5.65e-07 | 203 |
musculoskeletal system | 6.65e-07 | 167 |