FFCP PHASE1:Hg19::chr1:65992049..65992062,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:65992049..65992062,+ | |||
|coexpression_cluster_id=C2597 | |||
|description=CAGE_peak_at_chr1:65992049..65992062,+ | |description=CAGE_peak_at_chr1:65992049..65992062,+ | ||
|id=chr1:65992049..65992062,+ | |id=chr1:65992049..65992062,+ | ||
|ontology_enrichment_celltype=CL:0002552!7.71e-08!5;CL:0000197!5.48e-07!6;CL:0000098!5.48e-07!6;CL:0002167!5.48e-07!6 | |ontology_enrichment_celltype=CL:0002552!7.71e-08!5;CL:0000197!5.48e-07!6;CL:0000098!5.48e-07!6;CL:0002167!5.48e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000197;3.84e-18;6!CL:0000098;3.84e-18;6!CL:0002167;3.84e-18;6!CL:0002552;2.09e-10;5!CL:0000182;2.76e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.47e-18,6;CL:0000098,2.47e-18,6;CL:0002167,2.47e-18,6;CL:0002552,2.14e-10,5;CL:0000182,2.76e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.61e-13;1!UBERON:0008814;4.17e-07;2!UBERON:0010056;4.17e-07;2 | |||
|ontology_enrichment_disease=DOID:1036!2.47e-10!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-21!115;UBERON:0002240!1.33e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!1.82e-21!115;UBERON:0002240!1.33e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.95e-15;19!UBERON:0006925;1.95e-15;19!UBERON:0002363;1.61e-13;1!UBERON:0007195;2.78e-13;1!UBERON:0002423;1.01e-11;25!UBERON:0002365;1.99e-09;31!UBERON:0002330;1.99e-09;31!UBERON:0002368;3.40e-08;33!UBERON:0002360;2.15e-07;2!UBERON:0000094;2.15e-07;2!UBERON:0010743;2.15e-07;2!UBERON:0000341;4.17e-07;2!UBERON:0001828;7.99e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.93e-15,19;UBERON:0006925,1.93e-15,19;UBERON:0008836,1.93e-15,19;UBERON:0002363,1.61e-13,1;UBERON:0007645,1.61e-13,1;UBERON:0007647,1.61e-13,1;UBERON:0010115,1.61e-13,1;UBERON:0008835,2.48e-13,22;UBERON:0003894,2.48e-13,22;UBERON:0007195,2.95e-13,1;UBERON:0009854,9.46e-13,23;UBERON:0007499,1.00e-11,25;UBERON:0009497,1.00e-11,25;UBERON:0000015,1.00e-11,25;UBERON:0002423,1.00e-11,25;UBERON:0006235,1.00e-11,25;UBERON:0004161,1.00e-11,25;UBERON:0009856,2.85e-11,26;UBERON:0002365,1.93e-09,31;UBERON:0002330,1.93e-09,31;UBERON:0002368,2.38e-08,35;UBERON:0002360,2.15e-07,2;UBERON:0000094,2.15e-07,2;UBERON:0010743,2.15e-07,2;UBERON:0000341,3.48e-07,2;UBERON:0001828,8.12e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.413303124703062,3.56400857184616,1.48360157567134,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0,0,2.70362119990049,0.535286966391485,1.89242898040722,1.99140405487612,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0.451191321234361,0.588187602953219,0.671286347903371,0.569261198172555,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,7.14008349801914,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,5.12932817873289,3.97520666736664,0,0,0,0,0.640724475406168,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.452888530700021,0.154348316215889,0,0,0.245148321753905,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.91910583710883,0,0.0645889098360061,0,0,0.509177266225319,0,1.30630048738177,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.413303124703062,3.56400857184616,1.48360157567134,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,0,0,2.70362119990049,0.535286966391485,1.89242898040722,1.99140405487612,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0.183195186803725,0,0,0,0,0.451191321234361,0.588187602953219,0.671286347903371,0.569261198172555,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,7.14008349801914,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,5.12932817873289,3.97520666736664,0,0,0,0,0.640724475406168,0.628817220398664,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0,0,0,0.554645257684261,0,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.313972371402056,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.452888530700021,0.154348316215889,0,0,0.245148321753905,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,1.91910583710883,0,0.0645889098360061,0,0,0.509177266225319,0,1.30630048738177,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:65992049..65992062,+ | |short_description=p@chr1:65992049..65992062,+ | ||
}} | }} |
Latest revision as of 09:52, 28 July 2015
Short description: | p@chr1:65992049..65992062, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:65992049..65992062, + |
Coexpression cluster: | C2597_liver_dura_Olfactory_Nucleus_bone_Fibroblast_Hepatocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.47e-18 | 6 |
sensory epithelial cell | 2.47e-18 | 6 |
olfactory epithelial cell | 2.47e-18 | 6 |
fibroblast of gingiva | 2.14e-10 | 5 |
hepatocyte | 2.76e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.93e-15 | 19 |
digestive gland | 1.93e-15 | 19 |
liver bud | 1.93e-15 | 19 |
dura mater | 1.61e-13 | 1 |
future meninx | 1.61e-13 | 1 |
ectomeninx | 1.61e-13 | 1 |
future dura mater | 1.61e-13 | 1 |
hepatic diverticulum | 2.48e-13 | 22 |
liver primordium | 2.48e-13 | 22 |
stroma of bone marrow | 2.95e-13 | 1 |
digestive tract diverticulum | 9.46e-13 | 23 |
epithelial sac | 1.00e-11 | 25 |
epithelium of foregut-midgut junction | 1.00e-11 | 25 |
anatomical boundary | 1.00e-11 | 25 |
hepatobiliary system | 1.00e-11 | 25 |
foregut-midgut junction | 1.00e-11 | 25 |
septum transversum | 1.00e-11 | 25 |
sac | 2.85e-11 | 26 |
exocrine gland | 1.93e-09 | 31 |
exocrine system | 1.93e-09 | 31 |
endocrine gland | 2.38e-08 | 35 |
meninx | 2.15e-07 | 2 |
membrane organ | 2.15e-07 | 2 |
meningeal cluster | 2.15e-07 | 2 |
throat | 3.48e-07 | 2 |
gingiva | 8.12e-07 | 8 |