FFCP PHASE1:Hg19::chr1:59250073..59250095,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:59250073..59250095,+ | |||
|coexpression_cluster_id=C554 | |coexpression_cluster_id=C554 | ||
|description=CAGE_peak_at_chr1:59250073..59250095,+ | |description=CAGE_peak_at_chr1:59250073..59250095,+ | ||
|id=chr1:59250073..59250095,+ | |id=chr1:59250073..59250095,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.06e-18!140;CL:0002087!3.16e-16!119;CL:0002031!9.53e-16!124;CL:0002057!1.10e-14!42;CL:0000860!1.13e-12!45;CL:0000037!5.64e-11!172;CL:0000566!5.64e-11!172;CL:0000988!2.21e-10!182;CL:0002032!2.73e-10!165;CL:0000837!2.73e-10!165;CL:0000557!8.67e-09!71;CL:0000766!9.05e-09!76;CL:0000542!2.42e-08!53;CL:0000051!2.42e-08!53;CL:0000838!4.76e-08!52;CL:0002009!6.01e-08!65;CL:0000839!9.68e-08!70;CL:0002194!3.11e-07!63;CL:0000576!3.11e-07!63;CL:0000040!3.11e-07!63;CL:0000559!3.11e-07!63;CL:0002320!6.76e-07!365 | |ontology_enrichment_celltype=CL:0000738!2.06e-18!140;CL:0002087!3.16e-16!119;CL:0002031!9.53e-16!124;CL:0002057!1.10e-14!42;CL:0000860!1.13e-12!45;CL:0000037!5.64e-11!172;CL:0000566!5.64e-11!172;CL:0000988!2.21e-10!182;CL:0002032!2.73e-10!165;CL:0000837!2.73e-10!165;CL:0000557!8.67e-09!71;CL:0000766!9.05e-09!76;CL:0000542!2.42e-08!53;CL:0000051!2.42e-08!53;CL:0000838!4.76e-08!52;CL:0002009!6.01e-08!65;CL:0000839!9.68e-08!70;CL:0002194!3.11e-07!63;CL:0000576!3.11e-07!63;CL:0000040!3.11e-07!63;CL:0000559!3.11e-07!63;CL:0002320!6.76e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.94e-15;18!CL:0000789;1.94e-15;18!CL:0002419;1.94e-15;18!CL:0000624;2.13e-15;6!CL:0002087;1.37e-12;104!CL:0000860;2.60e-12;33!CL:0002057;2.60e-12;33!CL:0000542;1.54e-11;53!CL:0000236;6.95e-11;13!CL:0000084;2.14e-10;25!CL:0000576;2.87e-10;48!CL:0000623;1.68e-09;3!CL:0000766;7.48e-09;69!CL:0000473;1.14e-08;39!CL:0000234;1.14e-08;39!CL:0000226;1.41e-08;3!CL:0000842;1.41e-08;3!CL:0000767;1.63e-08;3!CL:0000898;5.24e-08;3!CL:0002393;8.43e-08;6!CL:0002397;8.43e-08;6!CL:0000738;2.18e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.72e-40,136;CL:0002031,6.33e-35,120;CL:0002087,7.65e-35,115;CL:0000037,1.61e-29,168;CL:0000988,2.59e-27,177;CL:0002032,6.74e-27,161;CL:0000837,6.74e-27,161;CL:0000838,1.98e-18,52;CL:0000766,3.44e-18,72;CL:0000542,5.74e-18,53;CL:0000051,5.74e-18,53;CL:0000860,7.78e-17,42;CL:0002057,7.78e-17,42;CL:0000557,1.11e-16,67;CL:0000134,7.53e-16,354;CL:0000839,1.64e-15,66;CL:0000624,1.86e-15,6;CL:0000791,2.50e-15,18;CL:0000789,2.50e-15,18;CL:0002420,2.50e-15,18;CL:0002419,2.50e-15,18;CL:0000790,2.50e-15,18;CL:0002320,3.11e-15,361;CL:0000473,4.21e-14,48;CL:0000234,4.21e-14,48;CL:0000219,9.00e-14,386;CL:0002009,1.11e-13,61;CL:0000048,3.89e-13,427;CL:0000034,6.76e-13,441;CL:0002194,6.97e-13,59;CL:0000576,6.97e-13,59;CL:0000040,6.97e-13,59;CL:0000559,6.97e-13,59;CL:0000723,1.00e-12,433;CL:0000763,8.61e-11,108;CL:0000049,8.61e-11,108;CL:0000084,2.55e-10,25;CL:0000827,2.55e-10,25;CL:0000236,2.64e-10,14;CL:0000623,1.74e-09,3;CL:0000825,1.74e-09,3;CL:0000226,1.06e-08,3;CL:0000842,1.06e-08,3;CL:0000767,2.23e-08,3;CL:0000898,4.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.94e-15;18!CL:0002057;2.25e-12;42!CL:0000051;1.54e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.81e-09!80;UBERON:0001474!2.11e-08!86;UBERON:0002390!2.80e-07!102;UBERON:0003061!2.80e-07!102;UBERON:0004765!3.35e-07!101;UBERON:0001434!3.35e-07!101 | |ontology_enrichment_uberon=UBERON:0002371!9.81e-09!80;UBERON:0001474!2.11e-08!86;UBERON:0002390!2.80e-07!102;UBERON:0003061!2.80e-07!102;UBERON:0004765!3.35e-07!101;UBERON:0001434!3.35e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.33e-15,76;UBERON:0002390,5.20e-15,98;UBERON:0003061,5.20e-15,98;UBERON:0001474,7.15e-15,82;UBERON:0002384,2.15e-14,371;UBERON:0004765,6.11e-13,90;UBERON:0002193,6.57e-13,108;UBERON:0002405,2.18e-12,93;UBERON:0001434,5.65e-11,100 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0,0.495065411840187,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0,0,0,0,0,1.18009283054671,2.30297638858328,6.03782880932696,0.919421224478927,0.30120591877825,0,0.232401601740905,0.142169232487422,0.293600439334847,14.9578760303607,7.2196001089251,10.8505435357926,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.697287110717054,0.822335776043652,0,2.01384674625505,1.2808035326455,1.89185783910868,3.44745680736619,1.29096936716765,1.35426486594342,0.752969358170419,0.545812300115692,0.449446968890169,2.44867113896722,4.17207735198922,1.91801137739712,0.329851300186716,1.79517291859469,0,1.16083695451434,1.13477044938228,0.622822248995575,1.50749199154046,1.5644487552606,1.3031330682307,0,0,0.632924774881769,0.211255286311942,2.55125159958052,0.419317291016752,0.336985893439485,0,0.48217676009124,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,1.77901850772711,5.54749289336459,1.20118796110804,1.14950487990897,0,1.90810750907073,3.98449078376614,1.76171156811282,1.91136614062614,0,1.68152568894461,0.263384084775077,3.540775862049,4.32311839024081,7.40165396398233,0,1.30368906653436,0.473447805734733,1.94826728407911,0.334231370655521,1.47302953737419,0.886135578334485,0.541607727530031,0.128091319725675,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0,2.68254345521345,2.40539211837841,1.01207876807801,0,0.651083453856419,0,1.05402583354441,0.511946444617674,1.24930726552346,0,0,8.66908995866349,6.15112450302067,6.08262496307756,0,0,0,0,0,0.144846518960824,0,0.973269740605272,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0,0,0.132957960518865,1.66943437013739,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,4.10468460520978,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,1.07633781413317,0.213557388818567,0,0.600182192168805,0.103052529238439,2.57640540045629,0.18611685633159,0.506328996723799,0,1.7670364197088,0.184099797284599,0.161646056818812,1.77504796258307,0.10075209822764,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0,0,1.56449532329816,0,0,1.39310378409594,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,2.57545848628462,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0.383382679165211,0,0.088048434013226,12.8543431635279,18.4473540373711,22.8498804501748,0.190493682876507,0.763976851116555,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.714889968290738,0.542621605391443,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,2.85273810081437,0,0.205476322550383,0.179060963239896,0,11.0337225713079,12.506399341852,12.3209314828558,0,0,0,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0.49076596687656,0,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,3.51505644408909,5.60856922128404,1.70764092485511,0,0,0.907170879989041,0,0.460385919864187,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.255225424989168,0,0,2.20368642781448,0,0,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,1.15755106853338,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0.213425530045242,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,1.00109485027145,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,1.1253553312841,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.349839999984783,0.724999575434793,0.1137934482855,0.254253650292766,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0,0,0.269604531922708,0,0.234264445725339,0.547364367646998,0,0,0.394584402849391,0,0,0.758238955541855,1.05226393590145,0.103688191397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| ||
|short_description=p@chr1:59250073..59250095,+ | |short_description=p@chr1:59250073..59250095,+ | ||
}} | }} |
Latest revision as of 09:24, 28 July 2015
Short description: | p@chr1:59250073..59250095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:59250073..59250095, + |
Coexpression cluster: | C554_Mast_Natural_CD8_CD14_CD4_Basophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.33e-15 | 76 |
hematopoietic system | 5.20e-15 | 98 |
blood island | 5.20e-15 | 98 |
bone element | 7.15e-15 | 82 |
connective tissue | 2.15e-14 | 371 |
skeletal element | 6.11e-13 | 90 |
hemolymphoid system | 6.57e-13 | 108 |
immune system | 2.18e-12 | 93 |
skeletal system | 5.65e-11 | 100 |