FFCP PHASE1:Hg19::chr1:50889667..50889679,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:50889667..50889679,+ | |||
|description=CAGE_peak_at_chr1:50889667..50889679,+ | |||
|id=chr1:50889667..50889679,+ | |||
|ontology_enrichment_celltype=CL:0002605!8.47e-10!3;CL:0000047!1.15e-09!8;CL:0002319!1.42e-07!25;CL:0000575!5.38e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.68e-25;2!CL:0002319;9.96e-21;25!CL:0002605;2.57e-16;3!CL:0000540;6.14e-09;6!CL:0000404;6.14e-09;6!CL:0000128;1.63e-07;7!CL:0000126;1.63e-07;7!CL:0000127;1.63e-07;7!CL:0000575;3.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.27e-24,8;CL:0002319,9.53e-21,25;CL:0002605,3.25e-16,3;CL:0000221,7.36e-12,72;CL:0000133,1.54e-11,59;CL:0000540,6.26e-09,6;CL:0000031,6.26e-09,6;CL:0000404,6.26e-09,6;CL:0000128,1.80e-07,7;CL:0000126,1.80e-07,7;CL:0000127,1.80e-07,7;CL:0002453,1.80e-07,7;CL:0000575,2.91e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;6.14e-09;6!CL:0000133;1.53e-08;59 | |||
|ontology_enrichment_disease=DOID:171!2.46e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.51e-19;10!DOID:3095;2.94e-13;22!DOID:2994;2.94e-13;22!DOID:3193;2.50e-07;2!DOID:962;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.11e-19,10;DOID:3095,2.98e-13,22;DOID:2994,2.98e-13,22;DOID:3193,2.43e-07,2;DOID:962,2.43e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.53e-08!94;UBERON:0001016!1.53e-08!94;UBERON:0001017!1.76e-08!82;UBERON:0005743!7.00e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.02e-27;4!UBERON:0000923;8.02e-27;4!UBERON:0010316;8.02e-27;4!UBERON:0005291;8.02e-27;4!UBERON:0002050;1.33e-21;5!UBERON:0005423;1.33e-21;5!UBERON:0003714;2.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.11e-11,171;UBERON:0000924,2.11e-11,171;UBERON:0006601,2.11e-11,171;UBERON:0001016,2.78e-09,89;UBERON:0001017,3.42e-08,81;UBERON:0003714,2.43e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,1.50561867580173,1.00434111675842,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33598710867173,2.60279707715243,2.31986643833309,0.670065061337395,5.74144876487847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04828206913899,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.435753854075961,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.104421949505455,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0,1.58186518546373,0,0,0,0.391102765469606,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,1.8747061194316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,1.86705782949428,1.2754495206101,3.84200869202907,3.91051442581271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47736419030255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0.91064876540519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0.0802413666891683,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,1.19463369395298,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0.430333232356058,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:50889667..50889679,+ | |||
}} |
Latest revision as of 08:57, 28 July 2015
Short description: | p@chr1:50889667..50889679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:50889667..50889679, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.27e-24 | 8 |
neural cell | 9.53e-21 | 25 |
astrocyte of the cerebral cortex | 3.25e-16 | 3 |
ectodermal cell | 7.36e-12 | 72 |
neurectodermal cell | 1.54e-11 | 59 |
neuron | 6.26e-09 | 6 |
neuroblast | 6.26e-09 | 6 |
electrically signaling cell | 6.26e-09 | 6 |
oligodendrocyte | 1.80e-07 | 7 |
macroglial cell | 1.80e-07 | 7 |
astrocyte | 1.80e-07 | 7 |
oligodendrocyte precursor cell | 1.80e-07 | 7 |
corneal epithelial cell | 2.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.11e-11 | 171 |
ectoderm | 2.11e-11 | 171 |
presumptive ectoderm | 2.11e-11 | 171 |
nervous system | 2.78e-09 | 89 |
central nervous system | 3.42e-08 | 81 |
neural tissue | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.11e-19 | 10 |
germ cell and embryonal cancer | 2.98e-13 | 22 |
germ cell cancer | 2.98e-13 | 22 |
peripheral nerve sheath neoplasm | 2.43e-07 | 2 |
neurofibroma | 2.43e-07 | 2 |