FFCP PHASE1:Hg19::chr1:46651830..46651834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:46651830..46651834,- | |||
|coexpression_cluster_id=C516 | |coexpression_cluster_id=C516 | ||
|description=CAGE_peak_at_chr1:46651830..46651834,- | |description=CAGE_peak_at_chr1:46651830..46651834,- | ||
|id=chr1:46651830..46651834,- | |id=chr1:46651830..46651834,- | ||
|ontology_enrichment_celltype=CL:0000159!7.05e-21!2;CL:1000497!7.44e-14!18;CL:0002518!7.44e-14!18;CL:1000507!1.04e-13!12;CL:1000494!1.04e-13!12;CL:0000313!1.97e-11!1;CL:0000319!3.28e-11!1;CL:1000449!2.47e-10!16;CL:0002149!9.90e-08!6;CL:0002255!9.90e-08!6;CL:0002681!1.72e-07!13;CL:0002584!1.72e-07!13 | |ontology_enrichment_celltype=CL:0000159!7.05e-21!2;CL:1000497!7.44e-14!18;CL:0002518!7.44e-14!18;CL:1000507!1.04e-13!12;CL:1000494!1.04e-13!12;CL:0000313!1.97e-11!1;CL:0000319!3.28e-11!1;CL:1000449!2.47e-10!16;CL:0002149!9.90e-08!6;CL:0002255!9.90e-08!6;CL:0002681!1.72e-07!13;CL:0002584!1.72e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002149;7.67e-18;6!CL:0002255;7.67e-18;6!CL:1000507;3.02e-11;10!CL:1000494;3.02e-11;10!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,7.67e-18,6;CL:0002255,7.67e-18,6;CL:1000507,3.02e-11,10;CL:1000494,3.02e-11,10;CL:1000449,5.93e-08,15;CL:1000497,3.58e-07,17;CL:0002518,3.58e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.73e-11;10 | |||
|ontology_enrichment_disease=DOID:2152!1.97e-11!1;DOID:3030!3.28e-11!1;DOID:299!5.08e-10!25;DOID:3001!9.90e-08!6 | |ontology_enrichment_disease=DOID:2152!1.97e-11!1;DOID:3030!3.28e-11!1;DOID:299!5.08e-10!25;DOID:3001!9.90e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.54e-17!27;UBERON:0003918!1.54e-17!27;UBERON:0005095!1.54e-17!27;UBERON:0007687!1.54e-17!27;UBERON:0000489!1.07e-14!32;UBERON:0009773!1.04e-13!12;UBERON:0001231!1.04e-13!12;UBERON:0004810!1.04e-13!12;UBERON:0004911!1.97e-11!1;UBERON:0006554!1.68e-10!44;UBERON:0004211!2.47e-10!16;UBERON:0001285!2.47e-10!16;UBERON:0007684!2.47e-10!16;UBERON:0003220!2.47e-10!16;UBERON:0004208!2.47e-10!16;UBERON:0001008!2.97e-10!45;UBERON:0006555!9.77e-10!17;UBERON:0005103!9.77e-10!17;UBERON:0000083!9.77e-10!17;UBERON:0009201!9.77e-10!17;UBERON:0004819!9.77e-10!17;UBERON:0006553!9.77e-10!17;UBERON:0003074!9.77e-10!17;UBERON:0003060!9.77e-10!17;UBERON:0000080!3.32e-09!18;UBERON:0002120!3.32e-09!18;UBERON:0004875!3.32e-09!18;UBERON:0005721!3.32e-09!18;UBERON:0005754!3.32e-09!18;UBERON:0007297!3.32e-09!18;UBERON:0004876!2.67e-08!20;UBERON:0005172!2.93e-08!55;UBERON:0005173!2.93e-08!55;UBERON:0003887!6.52e-08!21;UBERON:0001225!1.72e-07!13;UBERON:0008987!1.72e-07!13;UBERON:0002417!2.24e-07!61;UBERON:0000916!2.24e-07!61 | |ontology_enrichment_uberon=UBERON:0002113!1.54e-17!27;UBERON:0003918!1.54e-17!27;UBERON:0005095!1.54e-17!27;UBERON:0007687!1.54e-17!27;UBERON:0000489!1.07e-14!32;UBERON:0009773!1.04e-13!12;UBERON:0001231!1.04e-13!12;UBERON:0004810!1.04e-13!12;UBERON:0004911!1.97e-11!1;UBERON:0006554!1.68e-10!44;UBERON:0004211!2.47e-10!16;UBERON:0001285!2.47e-10!16;UBERON:0007684!2.47e-10!16;UBERON:0003220!2.47e-10!16;UBERON:0004208!2.47e-10!16;UBERON:0001008!2.97e-10!45;UBERON:0006555!9.77e-10!17;UBERON:0005103!9.77e-10!17;UBERON:0000083!9.77e-10!17;UBERON:0009201!9.77e-10!17;UBERON:0004819!9.77e-10!17;UBERON:0006553!9.77e-10!17;UBERON:0003074!9.77e-10!17;UBERON:0003060!9.77e-10!17;UBERON:0000080!3.32e-09!18;UBERON:0002120!3.32e-09!18;UBERON:0004875!3.32e-09!18;UBERON:0005721!3.32e-09!18;UBERON:0005754!3.32e-09!18;UBERON:0007297!3.32e-09!18;UBERON:0004876!2.67e-08!20;UBERON:0005172!2.93e-08!55;UBERON:0005173!2.93e-08!55;UBERON:0003887!6.52e-08!21;UBERON:0001225!1.72e-07!13;UBERON:0008987!1.72e-07!13;UBERON:0002417!2.24e-07!61;UBERON:0000916!2.24e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.02e-11;10!UBERON:0009773;3.02e-11;10!UBERON:0001231;3.02e-11;10!UBERON:0004810;3.02e-11;10!UBERON:0006555;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.02e-11,10;UBERON:0004211,5.93e-08,15;UBERON:0009773,5.93e-08,15;UBERON:0001231,5.93e-08,15;UBERON:0001285,5.93e-08,15;UBERON:0007684,5.93e-08,15;UBERON:0004208,5.93e-08,15;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16 | |||
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|short_description=p@chr1:46651830..46651834,- | |short_description=p@chr1:46651830..46651834,- | ||
}} | }} |
Latest revision as of 08:46, 28 July 2015
Short description: | p@chr1:46651830..46651834, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:46651830..46651834, - |
Coexpression cluster: | C516_endometrioid_clear_serous_anaplastic_malignant_oral_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 7.67e-18 | 6 |
stromal cell of endometrium | 7.67e-18 | 6 |
kidney tubule cell | 3.02e-11 | 10 |
nephron tubule epithelial cell | 3.02e-11 | 10 |
epithelial cell of nephron | 5.93e-08 | 15 |
kidney cell | 3.58e-07 | 17 |
kidney epithelial cell | 3.58e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.02e-11 | 10 |
nephron epithelium | 5.93e-08 | 15 |
renal tubule | 5.93e-08 | 15 |
nephron tubule | 5.93e-08 | 15 |
nephron | 5.93e-08 | 15 |
uriniferous tubule | 5.93e-08 | 15 |
nephrogenic mesenchyme | 5.93e-08 | 15 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.67e-18 | 6 |