FFCP PHASE1:Hg19::chr1:42595824..42595827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:42595824..42595827,- | |||
|coexpression_cluster_id=C322 | |coexpression_cluster_id=C322 | ||
|description=CAGE_peak_at_chr1:42595824..42595827,- | |description=CAGE_peak_at_chr1:42595824..42595827,- | ||
|id=chr1:42595824..42595827,- | |id=chr1:42595824..42595827,- | ||
|ontology_enrichment_celltype=CL:0000174!1.90e-09!3;CL:0002174!8.00e-08!1;CL:0000501!8.00e-08!1;CL:0000319!1.25e-07!1;CL:1001319!1.95e-07!1;CL:1000600!1.95e-07!1 | |ontology_enrichment_celltype=CL:0000174!1.90e-09!3;CL:0002174!8.00e-08!1;CL:0000501!8.00e-08!1;CL:0000319!1.25e-07!1;CL:1001319!1.95e-07!1;CL:1000600!1.95e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002149;9.07e-18;6!CL:0002255;9.07e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,9.07e-18,6;CL:0002255,9.07e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5 | |||
|ontology_enrichment_disease=DOID:162!4.16e-10!235;DOID:14566!8.50e-10!239;DOID:305!1.77e-08!106;DOID:0050686!3.84e-08!137;DOID:3030!1.25e-07!1;DOID:6193!1.61e-07!1;DOID:5409!7.06e-07!4 | |ontology_enrichment_disease=DOID:162!4.16e-10!235;DOID:14566!8.50e-10!239;DOID:305!1.77e-08!106;DOID:0050686!3.84e-08!137;DOID:3030!1.25e-07!1;DOID:6193!1.61e-07!1;DOID:5409!7.06e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3001;9.07e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,9.07e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0004645!1.95e-07!1;UBERON:0001256!1.95e-07!1;UBERON:0001259!1.95e-07!1;UBERON:0001282!3.40e-07!1;UBERON:0009842!3.40e-07!1;UBERON:0003704!3.40e-07!1;UBERON:0001171!3.40e-07!1;UBERON:0001172!3.40e-07!1;UBERON:0002363!4.90e-07!1;UBERON:0007647!4.90e-07!1;UBERON:0010115!4.90e-07!1;UBERON:0005911!5.16e-07!82 | |ontology_enrichment_uberon=UBERON:0004645!1.95e-07!1;UBERON:0001256!1.95e-07!1;UBERON:0001259!1.95e-07!1;UBERON:0001282!3.40e-07!1;UBERON:0009842!3.40e-07!1;UBERON:0003704!3.40e-07!1;UBERON:0001171!3.40e-07!1;UBERON:0001172!3.40e-07!1;UBERON:0002363!4.90e-07!1;UBERON:0007647!4.90e-07!1;UBERON:0010115!4.90e-07!1;UBERON:0005911!5.16e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p@chr1:42595824..42595827,- | |short_description=p@chr1:42595824..42595827,- | ||
}} | }} |
Latest revision as of 08:18, 28 July 2015
Short description: | p@chr1:42595824..42595827, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:42595824..42595827, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 9.07e-18 | 6 |
stromal cell of endometrium | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 9.07e-18 | 6 |