FFCP PHASE1:Hg19::chr1:39045718..39045723,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:39045718..39045723,- | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_at_chr1:39045718..39045723,- | |description=CAGE_peak_at_chr1:39045718..39045723,- | ||
|id=chr1:39045718..39045723,- | |id=chr1:39045718..39045723,- | ||
|ontology_enrichment_celltype=CL:0002322!3.49e-18!5 | |ontology_enrichment_celltype=CL:0002322!3.49e-18!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;7.58e-23;6!CL:0000404;7.58e-23;6!CL:0000322;2.07e-12;3!CL:0000333;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.07e-23,6;CL:0000031,6.07e-23,6;CL:0000404,6.07e-23,6;CL:0000047,1.71e-17,8;CL:0000322,2.07e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000031;7.58e-23;6 | |||
|ontology_enrichment_disease=DOID:162!1.62e-11!235;DOID:14566!4.24e-11!239;DOID:0050686!1.66e-09!137;DOID:0060058!3.02e-08!10 | |ontology_enrichment_disease=DOID:162!1.62e-11!235;DOID:14566!4.24e-11!239;DOID:0050686!1.66e-09!137;DOID:0060058!3.02e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:3910;6.48e-18;2!DOID:3908;5.73e-08;5!DOID:3095;5.17e-07;22!DOID:2994;5.17e-07;22!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.48e-18,2;DOID:3908,5.73e-08,5;DOID:3095,5.40e-07,22;DOID:2994,5.40e-07,22;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.48e-18;2!UBERON:0002173;6.48e-18;2!UBERON:0002186;6.48e-18;2!UBERON:0004821;2.07e-12;3!UBERON:0007499;2.07e-12;3!UBERON:0003215;2.07e-12;3!UBERON:0010368;2.07e-12;3!UBERON:0009911;2.07e-12;3!UBERON:0002299;2.07e-12;3!UBERON:0006524;2.07e-12;3!UBERON:0008874;2.07e-12;3!UBERON:0002169;2.07e-12;3!UBERON:0004894;2.07e-12;3!UBERON:0009856;1.22e-09;4!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.48e-18,2;UBERON:0002173,6.48e-18,2;UBERON:0002186,6.48e-18,2;UBERON:0004821,2.07e-12,3;UBERON:0003215,2.07e-12,3;UBERON:0010368,2.07e-12,3;UBERON:0009911,2.07e-12,3;UBERON:0002299,2.07e-12,3;UBERON:0006524,2.07e-12,3;UBERON:0008874,2.07e-12,3;UBERON:0002169,2.07e-12,3;UBERON:0004894,2.07e-12,3;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.414644220061482,0.252320850875628,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,1.12527203925513,1.10031549277787,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12142462764199,0,0,0.425149840203366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,1.09265571963696,0,0.305966489225945,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:39045718..39045723,- | |short_description=p@chr1:39045718..39045723,- | ||
}} | }} |
Latest revision as of 07:58, 28 July 2015
Short description: | p@chr1:39045718..39045723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:39045718..39045723, - |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.07e-23 | 6 |
neuroblast | 6.07e-23 | 6 |
electrically signaling cell | 6.07e-23 | 6 |
neuronal stem cell | 1.71e-17 | 8 |
pneumocyte | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.48e-18 | 2 |
alveolar duct | 6.48e-18 | 2 |
bronchiole | 6.48e-18 | 2 |
pulmonary alveolus epithelium | 2.07e-12 | 3 |
alveolus | 2.07e-12 | 3 |
pulmonary lobule | 2.07e-12 | 3 |
lobule | 2.07e-12 | 3 |
alveolus of lung | 2.07e-12 | 3 |
alveolar system | 2.07e-12 | 3 |
pulmonary acinus | 2.07e-12 | 3 |
alveolar sac | 2.07e-12 | 3 |
alveolar wall | 2.07e-12 | 3 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.48e-18 | 2 |
non-small cell lung carcinoma | 5.73e-08 | 5 |
germ cell and embryonal cancer | 5.40e-07 | 22 |
germ cell cancer | 5.40e-07 | 22 |
neuroendocrine tumor | 7.17e-07 | 6 |