FFCP PHASE1:Hg19::chr1:35333224..35333237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:35333224..35333237,- | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr1:35333224..35333237,- | |description=CAGE_peak_at_chr1:35333224..35333237,- | ||
|id=chr1:35333224..35333237,- | |id=chr1:35333224..35333237,- | ||
|ontology_enrichment_celltype=CL:0002057!4.26e-37!42;CL:0000860!8.46e-34!45;CL:0000763!3.37e-26!112;CL:0000049!3.37e-26!112;CL:0002194!4.55e-26!63;CL:0000576!4.55e-26!63;CL:0000040!4.55e-26!63;CL:0000559!4.55e-26!63;CL:0002009!6.94e-25!65;CL:0000766!1.08e-23!76;CL:0000839!3.13e-22!70;CL:0000557!9.56e-22!71;CL:0000037!1.15e-16!172;CL:0000566!1.15e-16!172;CL:0000988!8.66e-15!182;CL:0002032!9.89e-15!165;CL:0000837!9.89e-15!165;CL:0002087!6.70e-13!119;CL:0000738!2.77e-11!140;CL:0002031!1.28e-09!124 | |ontology_enrichment_celltype=CL:0002057!4.26e-37!42;CL:0000860!8.46e-34!45;CL:0000763!3.37e-26!112;CL:0000049!3.37e-26!112;CL:0002194!4.55e-26!63;CL:0000576!4.55e-26!63;CL:0000040!4.55e-26!63;CL:0000559!4.55e-26!63;CL:0002009!6.94e-25!65;CL:0000766!1.08e-23!76;CL:0000839!3.13e-22!70;CL:0000557!9.56e-22!71;CL:0000037!1.15e-16!172;CL:0000566!1.15e-16!172;CL:0000988!8.66e-15!182;CL:0002032!9.89e-15!165;CL:0000837!9.89e-15!165;CL:0002087!6.70e-13!119;CL:0000738!2.77e-11!140;CL:0002031!1.28e-09!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.35e-39;33!CL:0002057;6.35e-39;33!CL:0000576;4.68e-27;48!CL:0000473;4.62e-26;39!CL:0000234;4.62e-26;39!CL:0000766;8.46e-13;69!CL:0000763;8.64e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.05e-43,42;CL:0002057,2.05e-43,42;CL:0000473,1.39e-37,48;CL:0000234,1.39e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,2.31e-28,61;CL:0000763,1.50e-26,108;CL:0000049,1.50e-26,108;CL:0000839,5.31e-26,66;CL:0000557,1.43e-25,67;CL:0000766,1.35e-23,72;CL:0002032,1.66e-16,161;CL:0000837,1.66e-16,161;CL:0000037,1.20e-15,168;CL:0000988,1.21e-14,177;CL:0002087,1.25e-13,115;CL:0002031,6.28e-13,120;CL:0000738,4.91e-11,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-34;42!CL:0000049;5.65e-11;108!UBERON:0010115;3.32e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.23e-25!115;UBERON:0002390!5.42e-22!102;UBERON:0003061!5.42e-22!102;UBERON:0002193!8.15e-21!112;UBERON:0002371!3.52e-19!80;UBERON:0002405!7.24e-18!115;UBERON:0001474!5.37e-17!86;UBERON:0001049!2.22e-16!57;UBERON:0005068!2.22e-16!57;UBERON:0006241!2.22e-16!57;UBERON:0007135!2.22e-16!57;UBERON:0001893!3.77e-15!34;UBERON:0002020!5.58e-15!34;UBERON:0003528!5.58e-15!34;UBERON:0002791!2.37e-14!33;UBERON:0002780!3.05e-14!41;UBERON:0001890!3.05e-14!41;UBERON:0006240!3.05e-14!41;UBERON:0003080!9.65e-14!42;UBERON:0004765!1.30e-13!101;UBERON:0001434!1.30e-13!101;UBERON:0001869!2.41e-13!32;UBERON:0001017!6.87e-13!82;UBERON:0005743!1.12e-12!86;UBERON:0002619!2.15e-12!22;UBERON:0001950!2.31e-12!20;UBERON:0002616!3.42e-12!59;UBERON:0003075!4.03e-12!86;UBERON:0007284!4.03e-12!86;UBERON:0002346!3.83e-11!90;UBERON:0000073!1.52e-10!94;UBERON:0001016!1.52e-10!94;UBERON:0000956!1.89e-10!25;UBERON:0000203!1.89e-10!25;UBERON:0000955!4.92e-10!69;UBERON:0006238!4.92e-10!69;UBERON:0003056!3.06e-08!61;UBERON:0001871!1.33e-07!7;UBERON:0003081!6.17e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.10e-10;3!UBERON:0002363;3.32e-08;1!UBERON:0000029;3.32e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.37e-25,93;UBERON:0002371,3.37e-22,76;UBERON:0002193,3.32e-21,108;UBERON:0002390,3.55e-21,98;UBERON:0003061,3.55e-21,98;UBERON:0001474,2.35e-20,82;UBERON:0004765,2.81e-18,90;UBERON:0001434,3.85e-16,100;UBERON:0002106,2.71e-10,3;UBERON:0004854,2.71e-10,3;UBERON:0009034,2.71e-10,3;UBERON:0002095,2.71e-10,3;UBERON:0004782,2.71e-10,3;UBERON:0003281,2.71e-10,3;UBERON:0009664,2.71e-10,3;UBERON:0002296,2.71e-10,3;UBERON:0005602,2.71e-10,3;UBERON:0001179,2.71e-10,3;UBERON:0006293,2.71e-10,3;UBERON:0003081,1.54e-09,203;UBERON:0002363,1.88e-08,1;UBERON:0007645,1.88e-08,1;UBERON:0007647,1.88e-08,1;UBERON:0010115,1.88e-08,1;UBERON:0002204,2.14e-08,167;UBERON:0000029,2.33e-08,1 | |||
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|short_description=p@chr1:35333224..35333237,- | |short_description=p@chr1:35333224..35333237,- | ||
}} | }} |
Latest revision as of 07:34, 28 July 2015
Short description: | p@chr1:35333224..35333237, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:35333224..35333237, - |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.05e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.05e-43 | 42 |
defensive cell | 1.39e-37 | 48 |
phagocyte | 1.39e-37 | 48 |
monopoietic cell | 2.04e-29 | 59 |
monocyte | 2.04e-29 | 59 |
monoblast | 2.04e-29 | 59 |
promonocyte | 2.04e-29 | 59 |
macrophage dendritic cell progenitor | 2.31e-28 | 61 |
myeloid cell | 1.50e-26 | 108 |
common myeloid progenitor | 1.50e-26 | 108 |
myeloid lineage restricted progenitor cell | 5.31e-26 | 66 |
granulocyte monocyte progenitor cell | 1.43e-25 | 67 |
myeloid leukocyte | 1.35e-23 | 72 |
hematopoietic oligopotent progenitor cell | 1.66e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-16 | 161 |
hematopoietic stem cell | 1.20e-15 | 168 |
hematopoietic cell | 1.21e-14 | 177 |
nongranular leukocyte | 1.25e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.28e-13 | 120 |
leukocyte | 4.91e-11 | 136 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.37e-25 | 93 |
bone marrow | 3.37e-22 | 76 |
hemolymphoid system | 3.32e-21 | 108 |
hematopoietic system | 3.55e-21 | 98 |
blood island | 3.55e-21 | 98 |
bone element | 2.35e-20 | 82 |
skeletal element | 2.81e-18 | 90 |
skeletal system | 3.85e-16 | 100 |
spleen | 2.71e-10 | 3 |
gastrointestinal system mesentery | 2.71e-10 | 3 |
stomach region | 2.71e-10 | 3 |
mesentery | 2.71e-10 | 3 |
gastrointestinal system serosa | 2.71e-10 | 3 |
mesentery of stomach | 2.71e-10 | 3 |
gut mesentery | 2.71e-10 | 3 |
dorsal mesentery | 2.71e-10 | 3 |
dorsal mesogastrium | 2.71e-10 | 3 |
peritoneal cavity | 2.71e-10 | 3 |
spleen primordium | 2.71e-10 | 3 |
lateral plate mesoderm | 1.54e-09 | 203 |
dura mater | 1.88e-08 | 1 |
future meninx | 1.88e-08 | 1 |
ectomeninx | 1.88e-08 | 1 |
future dura mater | 1.88e-08 | 1 |
musculoskeletal system | 2.14e-08 | 167 |
lymph node | 2.33e-08 | 1 |