FFCP PHASE1:Hg19::chr1:33608464..33608484,-: Difference between revisions
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|id=chr1:33608464..33608484,-
|short_description=p1@uc001bxa.1
|description=CAGE_peak_1_at_uc001bxa.1_5end
|association_with_transcript=346bp_to_uc001bxa.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=346bp_to_uc001bxa.1_5end | |||
|cluster_id=chr1:33608464..33608484,- | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_1_at_uc001bxa.1_5end | |||
|id=chr1:33608464..33608484,- | |||
|ontology_enrichment_celltype=CL:0002274!1.39e-18!5;CL:0000457!1.39e-18!5;CL:0002191!1.39e-18!5;CL:0000097!1.39e-18!5;CL:0000831!1.39e-18!5;CL:0002028!1.39e-18!5;CL:0000767!1.58e-11!3;CL:0000163!3.93e-10!9;CL:0000764!5.86e-08!2;CL:0000765!5.86e-08!2;CL:0000050!5.86e-08!2;CL:0000038!5.86e-08!2;CL:0000558!5.86e-08!2;CL:0000547!5.86e-08!2;CL:0000549!5.86e-08!2;CL:0000550!5.86e-08!2;CL:0000552!5.86e-08!2;CL:0000763!2.61e-07!112;CL:0000049!2.61e-07!112;CL:0000094!2.85e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.65e-63;5!CL:0000163;4.02e-35;9!CL:0000767;9.93e-18;3!CL:0002379;6.65e-14;1!CL:0000151;3.68e-08;36!CL:0000047;1.87e-07;2!CL:0000094;3.24e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.66e-63,5;CL:0002028,4.66e-63,5;CL:0000163,4.02e-35,9;CL:0000767,1.08e-17,3;CL:0002379,6.65e-14,1;CL:0000151,9.02e-09,36;CL:0000763,2.62e-08,108;CL:0000049,2.62e-08,108;CL:0000766,6.69e-08,72;CL:0000094,3.34e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;6.65e-14;1!DOID:3565;6.65e-14;1!DOID:8552;1.25e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.65e-14,1;DOID:3565,6.65e-14,1;DOID:8552,7.55e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.59e-10!15;UBERON:0000179!1.59e-10!15;UBERON:0000463!1.59e-10!15;UBERON:0002390!2.30e-07!102;UBERON:0003061!2.30e-07!102;UBERON:0007023!3.24e-07!115;UBERON:0002193!3.91e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.15e-20;15!UBERON:0000179;2.15e-20;15!UBERON:0000463;2.15e-20;15!UBERON:0002390;3.56e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-20,15;UBERON:0000179,2.24e-20,15;UBERON:0000463,2.24e-20,15;UBERON:0002390,2.16e-11,98;UBERON:0003061,2.16e-11,98;UBERON:0002193,3.10e-10,108 | |||
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| ||
|short_description=p1@uc001bxa.1 | |||
}} | }} |
Latest revision as of 07:29, 28 July 2015
Short description: | p1@uc001bxa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001bxa.1_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | 346bp_to_uc001bxa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.66e-63 | 5 |
basophil mast progenitor cell | 4.66e-63 | 5 |
endocrine cell | 4.02e-35 | 9 |
basophil | 1.08e-17 | 3 |
meningothelial cell | 6.65e-14 | 1 |
secretory cell | 9.02e-09 | 36 |
myeloid cell | 2.62e-08 | 108 |
common myeloid progenitor | 2.62e-08 | 108 |
myeloid leukocyte | 6.69e-08 | 72 |
granulocyte | 3.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 2.24e-20 | 15 |
haemolymphatic fluid | 2.24e-20 | 15 |
organism substance | 2.24e-20 | 15 |
hematopoietic system | 2.16e-11 | 98 |
blood island | 2.16e-11 | 98 |
hemolymphoid system | 3.10e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.65e-14 | 1 |
meningioma | 6.65e-14 | 1 |
chronic myeloid leukemia | 7.55e-14 | 1 |