FFCP PHASE1:Hg19::chr1:33608427..33608437,-: Difference between revisions
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|id=chr1:33608427..33608437,-
|short_description=p2@uc001bxa.1
|description=CAGE_peak_2_at_uc001bxa.1_5end
|association_with_transcript=393bp_to_uc001bxa.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=393bp_to_uc001bxa.1_5end | |||
|cluster_id=chr1:33608427..33608437,- | |||
|coexpression_cluster_id=C167 | |||
|description=CAGE_peak_2_at_uc001bxa.1_5end | |||
|id=chr1:33608427..33608437,- | |||
|ontology_enrichment_celltype=CL:0002274!1.91e-24!5;CL:0000457!1.91e-24!5;CL:0002191!1.91e-24!5;CL:0000097!1.91e-24!5;CL:0000831!1.91e-24!5;CL:0002028!1.91e-24!5;CL:0000767!5.97e-15!3;CL:0000163!1.89e-13!9;CL:0000763!4.00e-09!112;CL:0000049!4.00e-09!112;CL:0000766!2.10e-07!76;CL:0000842!5.48e-07!3;CL:0000037!6.33e-07!172;CL:0000566!6.33e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.69e-109;5!CL:0000163;4.22e-61;9!CL:0000767;2.88e-30;3!CL:0002379;3.67e-23;1!CL:0000151;2.85e-14;36!CL:0000094;5.08e-12;8!CL:0000081;5.31e-09;11!CL:0000766;1.15e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.51e-109,5;CL:0002028,1.51e-109,5;CL:0000163,3.97e-61,9;CL:0000767,2.67e-30,3;CL:0002379,4.10e-23,1;CL:0000151,1.49e-15,36;CL:0000766,9.95e-15,72;CL:0000094,4.94e-12,8;CL:0000763,8.08e-10,108;CL:0000049,8.08e-10,108;CL:0000081,5.20e-09,11;CL:0000839,1.96e-08,66;CL:0000557,2.60e-08,67;CL:0000738,9.09e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.67e-23;1!DOID:3565;3.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.10e-23,1;DOID:3565,4.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.95e-18!15;UBERON:0000179!1.95e-18!15;UBERON:0000463!1.95e-18!15;UBERON:0002390!2.77e-10!102;UBERON:0003061!2.77e-10!102;UBERON:0002193!5.08e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.16e-08,98;UBERON:0003061,5.16e-08,98;UBERON:0002371,2.37e-07,76;UBERON:0002193,2.87e-07,108;UBERON:0001474,7.97e-07,82 | |||
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| ||
|short_description=p2@uc001bxa.1 | |||
}} | }} |
Latest revision as of 07:29, 28 July 2015
Short description: | p2@uc001bxa.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc001bxa.1_5end |
Coexpression cluster: | C167_Basophils_Mast_Eosinophils_Neutrophils_Peripheral_Whole_CD4 |
Association with transcript: | 393bp_to_uc001bxa.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.51e-109 | 5 |
basophil mast progenitor cell | 1.51e-109 | 5 |
endocrine cell | 3.97e-61 | 9 |
basophil | 2.67e-30 | 3 |
meningothelial cell | 4.10e-23 | 1 |
secretory cell | 1.49e-15 | 36 |
myeloid leukocyte | 9.95e-15 | 72 |
granulocyte | 4.94e-12 | 8 |
myeloid cell | 8.08e-10 | 108 |
common myeloid progenitor | 8.08e-10 | 108 |
blood cell | 5.20e-09 | 11 |
myeloid lineage restricted progenitor cell | 1.96e-08 | 66 |
granulocyte monocyte progenitor cell | 2.60e-08 | 67 |
leukocyte | 9.09e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.16e-08 | 98 |
blood island | 5.16e-08 | 98 |
bone marrow | 2.37e-07 | 76 |
hemolymphoid system | 2.87e-07 | 108 |
bone element | 7.97e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.10e-23 | 1 |
meningioma | 4.10e-23 | 1 |