FFCP PHASE1:Hg19::chr1:33515862..33515880,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:33515862..33515880,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr1:33515862..33515880,- | |||
|id=chr1:33515862..33515880,- | |||
|ontology_enrichment_celltype=CL:0002057!7.52e-42!42;CL:0000860!3.18e-38!45;CL:0000766!1.56e-31!76;CL:0002194!2.49e-26!63;CL:0000576!2.49e-26!63;CL:0000040!2.49e-26!63;CL:0000559!2.49e-26!63;CL:0002009!3.72e-25!65;CL:0000839!1.61e-22!70;CL:0000557!4.88e-22!71;CL:0000763!6.37e-17!112;CL:0000049!6.37e-17!112;CL:0000738!7.78e-16!140;CL:0002087!1.79e-13!119;CL:0000094!4.23e-11!8;CL:0000037!2.73e-10!172;CL:0000566!2.73e-10!172;CL:0002031!4.77e-10!124;CL:0002032!2.87e-09!165;CL:0000837!2.87e-09!165;CL:0000988!5.21e-09!182;CL:0000063!2.77e-08!578;CL:0000081!1.24e-07!11;CL:0000548!1.40e-07!679;CL:0000004!1.40e-07!679;CL:0000255!1.40e-07!679;CL:0000012!2.08e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-52;33!CL:0002057;2.39e-52;33!CL:0000473;2.28e-35;39!CL:0000234;2.28e-35;39!CL:0000576;2.42e-33;48!CL:0000094;7.84e-28;8!CL:0000766;2.21e-25;69!CL:0000081;4.16e-20;11!CL:0000767;1.48e-19;3!CL:0000771;5.00e-14;2!CL:0000763;7.88e-14;100!CL:0002087;1.17e-09;104!CL:0002393;2.16e-09;6!CL:0002397;2.16e-09;6!CL:0000511;3.30e-07;1!CL:0002625;3.30e-07;1!CL:0000216;3.30e-07;1!CL:0002601;3.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.10e-60,42;CL:0002057,9.10e-60,42;CL:0000766,2.82e-56,72;CL:0000473,9.18e-52,48;CL:0000234,9.18e-52,48;CL:0002194,1.49e-40,59;CL:0000576,1.49e-40,59;CL:0000040,1.49e-40,59;CL:0000559,1.49e-40,59;CL:0002009,4.17e-39,61;CL:0000763,5.34e-36,108;CL:0000049,5.34e-36,108;CL:0000839,7.25e-36,66;CL:0000557,2.83e-35,67;CL:0000738,6.79e-30,136;CL:0000094,6.53e-28,8;CL:0000037,3.16e-23,168;CL:0002032,1.62e-22,161;CL:0000837,1.62e-22,161;CL:0000988,8.79e-22,177;CL:0002087,6.41e-21,115;CL:0000081,3.65e-20,11;CL:0000767,1.23e-19,3;CL:0002031,6.37e-18,120;CL:0000771,4.85e-14,2;CL:0000134,3.35e-08,354;CL:0002320,6.17e-08,361;CL:0000511,3.01e-07,1;CL:0002625,3.01e-07,1;CL:0000216,3.01e-07,1;CL:0000723,4.01e-07,433;CL:0002601,4.90e-07,1;CL:0000219,5.32e-07,386;CL:0000034,6.89e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-41;42!CL:0000049;1.44e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.81e-19!80;UBERON:0001474!2.68e-17!86;UBERON:0002390!8.43e-16!102;UBERON:0003061!8.43e-16!102;UBERON:0002193!2.54e-13!112;UBERON:0004765!4.63e-13!101;UBERON:0001434!4.63e-13!101;UBERON:0002405!5.34e-13!115;UBERON:0002204!2.66e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.30e-07;1!UBERON:0001343;3.30e-07;1!UBERON:0004910;3.30e-07;1!UBERON:0004813;3.30e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-30,76;UBERON:0001474,4.06e-28,82;UBERON:0002390,2.75e-25,98;UBERON:0003061,2.75e-25,98;UBERON:0004765,2.90e-25,90;UBERON:0002405,2.55e-24,93;UBERON:0002193,1.49e-22,108;UBERON:0001434,2.48e-22,100;UBERON:0002204,4.95e-13,167;UBERON:0003081,4.17e-11,203;UBERON:0002384,1.42e-07,371;UBERON:0001136,3.01e-07,1;UBERON:0001343,3.01e-07,1;UBERON:0004910,3.01e-07,1;UBERON:0005154,3.01e-07,1;UBERON:0005295,3.01e-07,1;UBERON:0004813,3.01e-07,1;UBERON:0005297,3.01e-07,1;UBERON:0005294,3.01e-07,1;UBERON:0010141,3.01e-07,1;UBERON:0005891,3.01e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,3.45446458287491,2.47705797305722,0,0,0.739508020333575,0,0,0,1.66198622559563,1.40381113229099,1.95309783644267,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,1.23882548358041,4.02769349251011,3.58624989140741,9.93225365532058,2.06847408441971,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,1.83650335422542,2.24650318953266,1.27867425159808,0.989553900560148,1.79517291859469,2.13112375266347,2.32167390902867,0,0.622822248995575,5.27622197039161,4.17186334736161,7.38442071997397,2.42159801053347,3.31449872388808,5.06339819905415,0,0.637812899895131,0.838634582033504,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895585227028483,0.871901815541886,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0.641715181398742,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.2942852049117,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0,0.267096106940212,0.330569830721956,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,1.06428319221179,0,0,0.75894634753143,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0.16480387422676,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,2.16082196982225,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0.686520205190771,0.151230923763239,0,0,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0.782982875895635,0,0,0.97894681802587,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.561689566824178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:33515862..33515880,- | |||
}} |
Latest revision as of 07:28, 28 July 2015
Short description: | p@chr1:33515862..33515880, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:33515862..33515880, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-30 | 76 |
bone element | 4.06e-28 | 82 |
hematopoietic system | 2.75e-25 | 98 |
blood island | 2.75e-25 | 98 |
skeletal element | 2.90e-25 | 90 |
immune system | 2.55e-24 | 93 |
hemolymphoid system | 1.49e-22 | 108 |
skeletal system | 2.48e-22 | 100 |
musculoskeletal system | 4.95e-13 | 167 |
lateral plate mesoderm | 4.17e-11 | 203 |
connective tissue | 1.42e-07 | 371 |
mesothelium | 3.01e-07 | 1 |
seminiferous tubule of testis | 3.01e-07 | 1 |
epithelium of male gonad | 3.01e-07 | 1 |
epithelial cord | 3.01e-07 | 1 |
sex cord | 3.01e-07 | 1 |
seminiferous tubule epithelium | 3.01e-07 | 1 |
testis sex cord | 3.01e-07 | 1 |
genital ridge | 3.01e-07 | 1 |
primitive sex cord of indifferent gonad | 3.01e-07 | 1 |
coelomic epithelium | 3.01e-07 | 1 |