FFCP PHASE1:Hg19::chr1:31211884..31211922,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31211884..31211922,- | |||
|coexpression_cluster_id=C2557 | |coexpression_cluster_id=C2557 | ||
|description=CAGE_peak_at_chr1:31211884..31211922,- | |description=CAGE_peak_at_chr1:31211884..31211922,- | ||
|id=chr1:31211884..31211922,- | |id=chr1:31211884..31211922,- | ||
|ontology_enrichment_celltype=CL:0000738!3.83e-68!140;CL:0000037!5.60e-68!172;CL:0000566!5.60e-68!172;CL:0002032!1.97e-64!165;CL:0000837!1.97e-64!165;CL:0000988!4.99e-64!182;CL:0002031!7.35e-57!124;CL:0002087!1.31e-54!119;CL:0000766!4.01e-42!76;CL:0000763!5.73e-42!112;CL:0000049!5.73e-42!112;CL:0000557!2.00e-36!71;CL:0000839!1.69e-35!70;CL:0002009!1.97e-33!65;CL:0002194!2.12e-32!63;CL:0000576!2.12e-32!63;CL:0000040!2.12e-32!63;CL:0000559!2.12e-32!63;CL:0002057!1.25e-30!42;CL:0000860!4.59e-27!45;CL:0000542!6.64e-19!53;CL:0000051!6.64e-19!53;CL:0000838!9.18e-19!52;CL:0000945!1.23e-11!24;CL:0000826!1.23e-11!24;CL:0000134!1.70e-11!358;CL:0002320!2.38e-10!365;CL:0000236!1.32e-08!14;CL:0000791!2.73e-08!18;CL:0000789!2.73e-08!18;CL:0002420!2.73e-08!18;CL:0002419!2.73e-08!18;CL:0000790!2.73e-08!18;CL:0000084!2.87e-07!25;CL:0000827!2.87e-07!25;CL:0000219!3.09e-07!390;CL:0000094!6.98e-07!8 | |ontology_enrichment_celltype=CL:0000738!3.83e-68!140;CL:0000037!5.60e-68!172;CL:0000566!5.60e-68!172;CL:0002032!1.97e-64!165;CL:0000837!1.97e-64!165;CL:0000988!4.99e-64!182;CL:0002031!7.35e-57!124;CL:0002087!1.31e-54!119;CL:0000766!4.01e-42!76;CL:0000763!5.73e-42!112;CL:0000049!5.73e-42!112;CL:0000557!2.00e-36!71;CL:0000839!1.69e-35!70;CL:0002009!1.97e-33!65;CL:0002194!2.12e-32!63;CL:0000576!2.12e-32!63;CL:0000040!2.12e-32!63;CL:0000559!2.12e-32!63;CL:0002057!1.25e-30!42;CL:0000860!4.59e-27!45;CL:0000542!6.64e-19!53;CL:0000051!6.64e-19!53;CL:0000838!9.18e-19!52;CL:0000945!1.23e-11!24;CL:0000826!1.23e-11!24;CL:0000134!1.70e-11!358;CL:0002320!2.38e-10!365;CL:0000236!1.32e-08!14;CL:0000791!2.73e-08!18;CL:0000789!2.73e-08!18;CL:0002420!2.73e-08!18;CL:0002419!2.73e-08!18;CL:0000790!2.73e-08!18;CL:0000084!2.87e-07!25;CL:0000827!2.87e-07!25;CL:0000219!3.09e-07!390;CL:0000094!6.98e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-30;33!CL:0002057;1.32e-30;33!CL:0000473;4.60e-30;39!CL:0000234;4.60e-30;39!CL:0000576;2.62e-27;48!CL:0000766;3.49e-25;69!CL:0002087;8.69e-19;104!CL:0000738;1.51e-17;136!CL:0000763;1.60e-15;100!CL:0000988;3.44e-12;177!CL:0000945;7.36e-11;24!CL:0000542;2.10e-10;53!CL:0000236;4.13e-09;13!CL:0000094;1.58e-08;8!CL:0000791;1.74e-08;18!CL:0000789;1.74e-08;18!CL:0002419;1.74e-08;18!CL:0000625;1.48e-07;11!CL:0000219;1.79e-07;193!CL:0000084;8.67e-07;25!CL:0000235;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.26e-82,136;CL:0000037,8.24e-75,168;CL:0002032,2.30e-73,161;CL:0000837,2.30e-73,161;CL:0000988,1.17e-69,177;CL:0002031,1.33e-69,120;CL:0002087,1.91e-66,115;CL:0000766,5.31e-60,72;CL:0000763,1.74e-52,108;CL:0000049,1.74e-52,108;CL:0000557,1.75e-52,67;CL:0000839,5.95e-50,66;CL:0002009,2.71e-48,61;CL:0002194,6.06e-47,59;CL:0000576,6.06e-47,59;CL:0000040,6.06e-47,59;CL:0000559,6.06e-47,59;CL:0000473,3.10e-45,48;CL:0000234,3.10e-45,48;CL:0000860,9.11e-40,42;CL:0002057,9.11e-40,42;CL:0000838,4.77e-18,52;CL:0000542,1.89e-17,53;CL:0000051,1.89e-17,53;CL:0000134,2.44e-14,354;CL:0002320,2.44e-13,361;CL:0000945,4.68e-11,24;CL:0000826,4.68e-11,24;CL:0000219,6.03e-10,386;CL:0000236,8.43e-10,14;CL:0000094,1.49e-08,8;CL:0000791,1.61e-08,18;CL:0000789,1.61e-08,18;CL:0002420,1.61e-08,18;CL:0002419,1.61e-08,18;CL:0000790,1.61e-08,18;CL:0002393,1.26e-07,9;CL:0002397,1.26e-07,9;CL:0000625,1.38e-07,11;CL:0000048,6.03e-07,427;CL:0000084,8.13e-07,25;CL:0000827,8.13e-07,25;CL:0000235,9.56e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-28;42!CL:0000049;5.54e-15;108!CL:0000051;2.10e-10;53!CL:0000790;1.74e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.03e-40!112;UBERON:0002390!1.35e-39!102;UBERON:0003061!1.35e-39!102;UBERON:0002371!1.69e-30!80;UBERON:0002405!5.22e-28!115;UBERON:0001474!3.57e-26!86;UBERON:0004765!3.51e-19!101;UBERON:0001434!3.51e-19!101;UBERON:0007023!3.73e-15!115;UBERON:0003081!1.30e-12!216;UBERON:0002384!1.61e-09!375 | |ontology_enrichment_uberon=UBERON:0002193!2.03e-40!112;UBERON:0002390!1.35e-39!102;UBERON:0003061!1.35e-39!102;UBERON:0002371!1.69e-30!80;UBERON:0002405!5.22e-28!115;UBERON:0001474!3.57e-26!86;UBERON:0004765!3.51e-19!101;UBERON:0001434!3.51e-19!101;UBERON:0007023!3.73e-15!115;UBERON:0003081!1.30e-12!216;UBERON:0002384!1.61e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-50,98;UBERON:0003061,2.11e-50,98;UBERON:0002193,3.51e-49,108;UBERON:0002405,2.29e-45,93;UBERON:0002371,3.41e-43,76;UBERON:0001474,3.62e-38,82;UBERON:0004765,1.49e-32,90;UBERON:0001434,7.17e-27,100;UBERON:0003081,1.97e-18,203;UBERON:0002384,1.53e-12,371;UBERON:0002204,1.09e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58480434487708,3.85872770414745,2.99100968991981,2.75354993794233,4.60595277716655,7.43117391917165,0,0,0,0.697204805222715,1.70603078984906,0.880801318004542,3.87796785972314,13.0353890855592,6.72733699219141,23.735040269432,24.9398122834614,18.8030164372956,67.6101810324976,63.48315853972,32.991432321543,28.1239134655878,22.2030659531786,14.5561994320699,26.4677000936378,13.5765174460423,14.1889337933151,80.3257436116321,60.6755602568797,75.8388324928314,90.3563229804503,98.7920263209402,66.0687044268549,258.028721268671,310.659298209659,239.112085048841,26.717955315124,29.7200849856231,21.7374622771674,25.5384129993154,13.6172453925874,27.4041789558053,14.5724225848911,14.6015217157656,16.2891633528837,34.507771650102,19.5187147073409,25.0005286078299,7.6051903072299,16.7957396972384,7.96702852931828,17.2986091965602,18.6219347123468,34.2345499664781,1.14005097496499,9.54800050555633,11.5078416871719,17.5996244461323,3.27683166757279,16.011166569544,5.9742231159311,8.40831572775626,2.87376219977242,3.96626923670917,5.72432252721218,30.7375003319102,30.5363338472888,37.0805031281472,1.32171328579026,2.24203425192614,0.790152254325231,2.360517241366,3.93010762749165,2.46721798799411,13.8764791174263,0.977766799900771,1.4203434172042,17.534405556712,23.3961959458865,5.59751224202191,4.65221178625604,11.6445661418957,8.58211842162024,7.67350150603282,5.75532666112866,5.25065033793112,17.0983820583681,6.67289534229272,3.47803076516627,10.4535523804977,10.7643875562688,3.44898444241729,4.81078423675682,10.3738073727996,1.59282707162048,3.25541726928209,2.85135613334512,4.66782869141096,5.75939750194883,3.74792179657038,4.02521328474829,4.10563998460523,6.45141578319144,5.08136371988664,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,2.59637914923747,3.13433527138681,4.52057065764142,1.66943437013739,3.43196946468077,0.74291500265913,0.198762407366705,0,0.347140501607594,0,0.419499436209906,1.37559020970034,0.417989933073621,0.258416759169329,0.35576626268671,0.66944122552934,4.83395180530976,3.04108842287405,10.4946684745713,3.30896772311282,4.0507097394088,0.803697554556718,0.44905874525234,0.225222960966644,0,0,0.183201743930407,34.2629085333764,31.022421131866,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61246251376468,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,5.16708818237254,0,0,0,0,0.982827216677626,2.36315962672562,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,2.45422961193825,1.85194205030644,1.14152491340759,0,0,11.0797652739329,7.95614501473408,9.06650089961242,0,0,0,0,0,0,9.36060152002293,66.1243739439328,125.640838017708,74.5100159165691,96.9541888714598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2435670961786,44.1986240460271,46.383466686267,0,0,0,0.144781306667579,0,0,0.448340575974109,5.91092280605782,4.9594342217689,5.77543663258868,0,0,0,0.837581326671744,0,286.869690171771,364.97698022891,470.776023263336,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,14.4737618286021,26.3171324998713,13.2342171676271,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.510281115829547,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0.784306353074702,0,0,0,7.93415789687461,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,10.4499618862225,0,0,0,0,0.507447609232169,0.764637207142375,2.84823593587081,1.19115887728894,2.87953591160336,2.59389324477087,1.62009431171434,2.37937552888281,0,0,0,0.743212700502875,0.432807638929335,0,0.797131363644112,0.798317485731266,2.2980644415884,1.2700414963433,0,2.52717460302113,1.36940807419915,1.09675927041116,0,1.35433422241283,0.642352300414798,0.605399121573143,3.40676990152261,2.40453741329035,0.614481528616916,1.3420566473545,3.00328455081435,0.976940477010201,1.39203086947621,0,0.811367035427949,0,0,0,24.6133741176782,0,3.45474491260183,0,0.47748896947538,0,0,0.994147647766298,0.140669416410513,0,0.16480387422676,0,0.19924798825107,14.6430475231508,0,0,11.9392261297237,0,0,0,3.5810065915881,2.86065876347107,43.1069566224492,0,0,2.13366625772258,0,0,0,4.34999745260876,0,0,0,0,0,0,1.77148277162768,0.723578631752448,0,0.110579259931225,0,0.658156191461918,0,0,0.846452843541768,0,0,0,0,0.31900115973192,0.732780747214898,4.26427820814908,0,3.61054589708557,2.16075186470203,0,0,0.167821586975843,0.189753732724185,3.49660473756833,0,0,0,0,0,1.50377859655677,8.55442202907076,0.593042257361244,1.23563938946503,0.104421949505455,0.337005664903385,0,2.81117334870407,3.28418620588199,0,0,0,0,0,2.78020950365347,0,0,0,0,0.313932918407225,1.19472429772959,0,0.277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| ||
|short_description=p@chr1:31211884..31211922,- | |short_description=p@chr1:31211884..31211922,- | ||
}} | }} |
Latest revision as of 07:05, 28 July 2015
Short description: | p@chr1:31211884..31211922, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31211884..31211922, - |
Coexpression cluster: | C2557_Neutrophils_CD14_Mast_lymph_spleen_blood_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.11e-50 | 98 |
blood island | 2.11e-50 | 98 |
hemolymphoid system | 3.51e-49 | 108 |
immune system | 2.29e-45 | 93 |
bone marrow | 3.41e-43 | 76 |
bone element | 3.62e-38 | 82 |
skeletal element | 1.49e-32 | 90 |
skeletal system | 7.17e-27 | 100 |
lateral plate mesoderm | 1.97e-18 | 203 |
connective tissue | 1.53e-12 | 371 |
musculoskeletal system | 1.09e-08 | 167 |