FFCP PHASE1:Hg19::chr1:31206348..31206387,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:31206348..31206387,- to FFCP PHASE1:Hg19::chr1:31206348..31206387,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:31206348..31206387,- | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr1:31206348..31206387,- | |||
|id=chr1:31206348..31206387,- | |||
|ontology_enrichment_celltype=CL:0000037!2.55e-77!172;CL:0000566!2.55e-77!172;CL:0002032!7.02e-75!165;CL:0000837!7.02e-75!165;CL:0000738!6.66e-73!140;CL:0000988!9.49e-71!182;CL:0002031!1.17e-61!124;CL:0002087!2.59e-60!119;CL:0000763!1.99e-53!112;CL:0000049!1.99e-53!112;CL:0000766!2.94e-50!76;CL:0000557!2.40e-43!71;CL:0000839!2.29e-42!70;CL:0002009!2.10e-41!65;CL:0002194!2.67e-40!63;CL:0000576!2.67e-40!63;CL:0000040!2.67e-40!63;CL:0000559!2.67e-40!63;CL:0002057!4.40e-36!42;CL:0000860!2.80e-32!45;CL:0000542!1.06e-17!53;CL:0000051!1.06e-17!53;CL:0000838!3.08e-17!52;CL:0000134!7.52e-12!358;CL:0002320!7.80e-11!365;CL:0000945!5.43e-09!24;CL:0000826!5.43e-09!24;CL:0000094!5.00e-08!8;CL:0000084!5.84e-08!25;CL:0000827!5.84e-08!25;CL:0000219!1.00e-07!390;CL:0002393!1.44e-07!9;CL:0002397!1.44e-07!9;CL:0000791!3.81e-07!18;CL:0000789!3.81e-07!18;CL:0002420!3.81e-07!18;CL:0002419!3.81e-07!18;CL:0000790!3.81e-07!18;CL:0000236!4.47e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.02e-44;33!CL:0002057;4.02e-44;33!CL:0000473;4.22e-44;39!CL:0000234;4.22e-44;39!CL:0000576;2.77e-36;48!CL:0000766;1.83e-33;69!CL:0000763;2.40e-20;100!CL:0000738;1.20e-18;136!CL:0002087;2.85e-18;104!CL:0000094;3.23e-12;8!CL:0000988;2.90e-11;177!CL:0000235;3.33e-10;6!CL:0002393;1.48e-08;6!CL:0002397;1.48e-08;6!CL:0000081;2.35e-08;11!CL:0000945;5.51e-08;24!CL:0000219;1.52e-07;193!CL:0000840;1.71e-07;5!CL:0000236;1.86e-07;13!CL:0000542;2.73e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.80e-82,72;CL:0000738,1.31e-81,136;CL:0002032,1.11e-75,161;CL:0000837,1.11e-75,161;CL:0000037,7.57e-75,168;CL:0002031,2.49e-71,120;CL:0000557,4.04e-71,67;CL:0002087,5.47e-70,115;CL:0002009,1.71e-69,61;CL:0000988,1.91e-69,177;CL:0000839,6.29e-68,66;CL:0002194,1.10e-67,59;CL:0000576,1.10e-67,59;CL:0000040,1.10e-67,59;CL:0000559,1.10e-67,59;CL:0000763,1.88e-66,108;CL:0000049,1.88e-66,108;CL:0000473,2.56e-65,48;CL:0000234,2.56e-65,48;CL:0000860,3.03e-56,42;CL:0002057,3.03e-56,42;CL:0000134,4.19e-20,354;CL:0002320,3.78e-19,361;CL:0000219,8.14e-16,386;CL:0000048,2.41e-12,427;CL:0000094,3.30e-12,8;CL:0000034,4.64e-12,441;CL:0000723,8.59e-12,433;CL:0000235,3.45e-10,6;CL:0000542,3.77e-10,53;CL:0000051,3.77e-10,53;CL:0000838,1.34e-09,52;CL:0002393,1.84e-09,9;CL:0002397,1.84e-09,9;CL:0000236,1.35e-08,14;CL:0000081,2.39e-08,11;CL:0000945,3.54e-08,24;CL:0000826,3.54e-08,24;CL:0000840,2.32e-07,5;CL:0001029,2.32e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-40;42!CL:0000049;1.35e-18;108!CL:0000051;2.73e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!3.56e-08!51;DOID:0060083!3.56e-08!51;DOID:1240!3.93e-08!39;DOID:8692!5.19e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.73e-46!112;UBERON:0002390!8.98e-46!102;UBERON:0003061!8.98e-46!102;UBERON:0002371!3.39e-36!80;UBERON:0001474!1.17e-31!86;UBERON:0002405!4.52e-30!115;UBERON:0004765!7.22e-23!101;UBERON:0001434!7.22e-23!101;UBERON:0003081!5.99e-13!216;UBERON:0007023!4.66e-10!115;UBERON:0002384!8.25e-10!375;UBERON:0002204!8.18e-08!167;UBERON:0000178!2.96e-07!15;UBERON:0000179!2.96e-07!15;UBERON:0000463!2.96e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.93e-09;15!UBERON:0000179;2.93e-09;15!UBERON:0000463;2.93e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-66,98;UBERON:0003061,3.17e-66,98;UBERON:0002193,7.77e-62,108;UBERON:0002371,2.82e-60,76;UBERON:0001474,2.27e-54,82;UBERON:0002405,1.18e-52,93;UBERON:0004765,9.98e-48,90;UBERON:0001434,6.21e-41,100;UBERON:0003081,2.01e-22,203;UBERON:0002384,7.50e-18,371;UBERON:0002204,7.37e-17,167;UBERON:0000178,3.39e-09,15;UBERON:0000179,3.39e-09,15;UBERON:0000463,3.39e-09,15;UBERON:0000926,1.24e-07,315;UBERON:0004120,1.24e-07,315;UBERON:0006603,1.24e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.246301768349837,0.865818594450472,2.36018566109342,1.53531759238885,4.02521920621798,0,0,0,1.16200800870452,0,0.293600439334847,3.87796785972314,5.61524452916397,5.859293509328,3.13481663935894,1.94336199611388,0.77272670290256,10.03247847579,4.91238726795452,7.5201058968223,11.3890228083785,9.86802931252382,7.43295290148249,10.3569261235974,8.19714260893122,7.33094912654614,11.721353145045,5.80936215225443,9.47985406160392,11.8592673911841,10.3704337021981,10.1125568000288,12.549439587207,6.09765151444578,15.983428144976,5.27762080298746,10.5715738539465,10.2293940127847,10.1573233520004,9.64554881974938,14.9477339758938,14.5724225848911,8.86520961314342,6.5156653411535,9.6863920421339,9.20694089968912,7.59509729858123,2.95757400836718,3.61427309940574,1.88692780957538,3.03287304095537,4.20495299956218,2.08943262706204,0.855038231223746,2.78483348078726,1.64397738388171,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,1.60158394814405,3.4485146397269,1.32208974556972,0,10.2458334439701,15.8554041130153,12.6150165281326,2.64342657158052,1.12101712596307,0.526768169550154,0.786839080455332,1.96505381374582,2.46721798799411,1.17030546773475,1.30368906653436,0.946895611469467,3.89653456815823,2.89667187901451,1.47302953737419,0.886135578334485,1.08321545506006,2.43373507478783,3.64166173167659,3.12432018746985,3.03985019564433,2.31842468588042,1.33457906845854,1.33770414044857,1.04535523804977,1.35971211237079,0.766440987203842,1.03088233644789,1.26509846009751,0.95569624297229,0.651083453856419,0.950452044448374,0.451725357233318,0.76791966692651,0,0.710331756132051,0,1.61285394579786,3.7441627409691,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,1.29818957461873,2.26368658489047,3.58986493400936,2.38490624305342,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0.835979866147242,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0.81014194788176,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,9.22462922052443,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,1.85194205030644,0.190254152234598,0,0,3.20082107913617,6.31811515875942,5.49935300468294,0,0,0,0,0,0,0.492663237895943,4.66656700270098,2.07328115540772,2.16179930125442,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,18.0812552915566,63.2501818449095,0,0,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0.985153801009636,3.01878604803324,2.18183161675572,0,0,0,0,0,22.4702107184155,68.8071356169257,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.8828556147351,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.53723804616085,3.0585488285695,2.27858874869665,2.1440859791201,1.23408681925858,2.59389324477087,2.70015718619057,2.37937552888281,0,0,0,1.11481905075431,0,0,0.956557636372934,0.399158742865633,0.5745161103971,0.635020748171649,0,1.96558024679421,1.14117339516596,0.94007937463814,0,1.18504244461122,0.802940375518498,0.201799707191048,0.425846237690326,0.687010689511529,0.614481528616916,1.56573275524691,1.33479313369527,0.586164286206121,0.556812347790485,0,1.6227340708559,0,2.81974010175699,0,0.439524537815682,0,0.557216921387392,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,1.10513566212459,0,0,1.6001024709939,0,0,0,1.53471711068062,0.295930216910801,4.7896618469388,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,1.06606955203727,3.06579894587209,2.98262487150547,3.15802195610297,0,0,0,0.189753732724185,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0.802577647298789,0.468528891450678,2.00700268137233,0,0,0,1.20990716048664,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,0,0.408610218334727,0,0,0,1.1248694577575,1.5476039091159,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,1.23138781124008,0,0,0.293104467356165,0,0.258565912723101,0.39669780522807,0,0,1.60181118851542,0.157204305099666,3.31391244277756,9.92332043623902,1.7785046870815,1.82688897571344,0,0,0,0,0.327872630709804,0,0,0.366078794705889,0.625954653532499,0.57340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| ||
|short_description=p@chr1:31206348..31206387,- | |||
}} | }} |
Latest revision as of 07:04, 28 July 2015
Short description: | p@chr1:31206348..31206387, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31206348..31206387, - |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-66 | 98 |
blood island | 3.17e-66 | 98 |
hemolymphoid system | 7.77e-62 | 108 |
bone marrow | 2.82e-60 | 76 |
bone element | 2.27e-54 | 82 |
immune system | 1.18e-52 | 93 |
skeletal element | 9.98e-48 | 90 |
skeletal system | 6.21e-41 | 100 |
lateral plate mesoderm | 2.01e-22 | 203 |
connective tissue | 7.50e-18 | 371 |
musculoskeletal system | 7.37e-17 | 167 |
blood | 3.39e-09 | 15 |
haemolymphatic fluid | 3.39e-09 | 15 |
organism substance | 3.39e-09 | 15 |
mesoderm | 1.24e-07 | 315 |
mesoderm-derived structure | 1.24e-07 | 315 |
presumptive mesoderm | 1.24e-07 | 315 |