FFCP PHASE1:Hg19::chr1:27992853..27992930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27992853..27992930,- | |||
|coexpression_cluster_id=C1855 | |||
|description=CAGE_peak_at_chr1:27992853..27992930,- | |description=CAGE_peak_at_chr1:27992853..27992930,- | ||
|id=chr1:27992853..27992930,- | |id=chr1:27992853..27992930,- | ||
|ontology_enrichment_celltype=CL:0002194!9.05e-10!63;CL:0000576!9.05e-10!63;CL:0000040!9.05e-10!63;CL:0000559!9.05e-10!63;CL:0002009!9.13e-09!65;CL:0002057!2.63e-08!42;CL:0000839!3.39e-08!70;CL:0000766!3.94e-08!76;CL:0000557!9.06e-08!71;CL:0000860!2.24e-07!45 | |ontology_enrichment_celltype=CL:0002194!9.05e-10!63;CL:0000576!9.05e-10!63;CL:0000040!9.05e-10!63;CL:0000559!9.05e-10!63;CL:0002009!9.13e-09!65;CL:0002057!2.63e-08!42;CL:0000839!3.39e-08!70;CL:0000766!3.94e-08!76;CL:0000557!9.06e-08!71;CL:0000860!2.24e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.19e-11;39!CL:0000234;1.19e-11;39!CL:0000860;3.54e-09;33!CL:0002057;3.54e-09;33!CL:0000235;3.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.08e-11,48;CL:0000234,5.08e-11,48;CL:0002194,6.87e-10,59;CL:0000576,6.87e-10,59;CL:0000040,6.87e-10,59;CL:0000559,6.87e-10,59;CL:0002009,2.94e-09,61;CL:0000839,7.19e-08,66;CL:0000557,1.27e-07,67;CL:0000766,1.51e-07,72;CL:0000860,3.27e-07,42;CL:0002057,3.27e-07,42;CL:0000235,3.64e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!8.88e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.04e-07,76 | |||
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| ||
|short_description=p@chr1:27992853..27992930,- | |short_description=p@chr1:27992853..27992930,- | ||
}} | }} |
Latest revision as of 06:51, 28 July 2015
Short description: | p@chr1:27992853..27992930, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27992853..27992930, - |
Coexpression cluster: | C1855_Fibroblast_Smooth_gall_mesothelioma_choriocarcinoma_mesenchymal_rectal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.08e-11 | 48 |
phagocyte | 5.08e-11 | 48 |
monopoietic cell | 6.87e-10 | 59 |
monocyte | 6.87e-10 | 59 |
monoblast | 6.87e-10 | 59 |
promonocyte | 6.87e-10 | 59 |
macrophage dendritic cell progenitor | 2.94e-09 | 61 |
myeloid lineage restricted progenitor cell | 7.19e-08 | 66 |
granulocyte monocyte progenitor cell | 1.27e-07 | 67 |
myeloid leukocyte | 1.51e-07 | 72 |
classical monocyte | 3.27e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.27e-07 | 42 |
macrophage | 3.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.04e-07 | 76 |