FFCP PHASE1:Hg19::chr1:27992774..27992780,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27992774..27992780,- | |||
|coexpression_cluster_id=C296 | |||
|description=CAGE_peak_at_chr1:27992774..27992780,- | |description=CAGE_peak_at_chr1:27992774..27992780,- | ||
|id=chr1:27992774..27992780,- | |id=chr1:27992774..27992780,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;8.20e-11;1!CL:0002379;8.20e-11;1!CL:0002595;1.66e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.61e-10,1;CL:0002595,1.79e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.79e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.20e-11;1!DOID:10165;8.20e-11;1!DOID:3620;8.20e-11;1!DOID:3565;8.20e-11;1!DOID:1798;8.20e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.22e-11,1;DOID:10165,8.22e-11,1;DOID:1798,8.22e-11,1;DOID:3620,1.61e-10,1;DOID:3565,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.23e-21!115;UBERON:0001049!1.99e-11!57;UBERON:0005068!1.99e-11!57;UBERON:0006241!1.99e-11!57;UBERON:0007135!1.99e-11!57;UBERON:0003075!1.51e-10!86;UBERON:0007284!1.51e-10!86;UBERON:0002020!2.08e-10!34;UBERON:0003528!2.08e-10!34;UBERON:0002346!1.20e-09!90;UBERON:0002616!1.15e-08!59;UBERON:0001869!1.40e-08!32;UBERON:0002780!1.54e-08!41;UBERON:0001890!1.54e-08!41;UBERON:0006240!1.54e-08!41;UBERON:0003080!3.28e-08!42;UBERON:0002791!3.46e-08!33;UBERON:0001893!8.08e-08!34;UBERON:0005743!3.78e-07!86;UBERON:0002308!4.36e-07!9;UBERON:0000125!4.36e-07!9;UBERON:0002619!6.31e-07!22;UBERON:0000955!7.39e-07!69;UBERON:0006238!7.39e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.79e-11;1!UBERON:0001785;2.79e-11;1!UBERON:0002464;2.79e-11;1!UBERON:0004904;2.79e-11;1!UBERON:0001021;2.79e-11;1!UBERON:0002171;3.23e-11;1!UBERON:0006518;3.23e-11;1!UBERON:0008949;3.23e-11;1!UBERON:0000101;3.23e-11;1!UBERON:0002167;3.23e-11;1!UBERON:0002135;8.20e-11;1!UBERON:0002426;8.20e-11;1!UBERON:0003831;8.20e-11;1!UBERON:0003898;8.20e-11;1!UBERON:0004830;8.20e-11;1!UBERON:0003830;8.20e-11;1!UBERON:0005175;8.20e-11;1!UBERON:0001774;8.20e-11;1!UBERON:0001103;8.20e-11;1!UBERON:0003834;1.66e-08;5!UBERON:0001533;1.66e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.79e-11,1;UBERON:0001785,2.79e-11,1;UBERON:0002464,2.79e-11,1;UBERON:0004904,2.79e-11,1;UBERON:0001021,2.79e-11,1;UBERON:0003902,2.79e-11,1;UBERON:0005425,2.79e-11,1;UBERON:0002171,3.41e-11,1;UBERON:0006518,3.41e-11,1;UBERON:0008949,3.41e-11,1;UBERON:0000101,3.41e-11,1;UBERON:0002167,3.41e-11,1;UBERON:0002135,3.76e-11,1;UBERON:0002426,4.15e-11,1;UBERON:0003831,4.15e-11,1;UBERON:0003898,4.15e-11,1;UBERON:0004830,4.15e-11,1;UBERON:0003830,4.15e-11,1;UBERON:0005175,4.15e-11,1;UBERON:0001774,4.15e-11,1;UBERON:0001103,4.15e-11,1;UBERON:0010084,4.15e-11,1;UBERON:0003834,1.79e-08,5;UBERON:0001533,1.79e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.659702600373432,0,0,0.870627715885752,0,0,0.251248665256743,0,0,1.21079900526674,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0.551365343546124,0,1.31535265576129,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.71623345421307,0,0.307160702099232,0,0.562677665642051,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.434589487688032,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,13.6885967914362,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.67569440763353,0.229160424011684,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.904980694530854,1.19009341568421,0,0,0.106787412567695,0,2.07119527673598,0,0,0.121792598380896,0,0,0,0,0,0,0,0.732157589411779,0.625954653532499,0,0.221858103073705,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0.428883182749851,0,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,1.10606748921385,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.968853873791107,4.28308260777463,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.40341013740704,0,1.30953347240711,0,0,0,1.56215619722769,0.620060389503552,0,0,0,0,0,0.127762427639595,0,1.3451348888753,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.942693539496011,0.840816489941367,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,1.57046773691956,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.25458863311266,2.42540626749863,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.659702600373432,0,0,0.870627715885752,0,0,0.251248665256743,0,0,1.21079900526674,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,1.23633464639278,0,0,0,0,0,0,0,1.20190447125277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,1.58510321173008,0,0,1.21856744815642,0,0,0,0,0.551365343546124,0,1.31535265576129,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0,0,0,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0.71623345421307,0,0.307160702099232,0,0.562677665642051,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0.434589487688032,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,13.6885967914362,0,0,0.19980960958213,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.67569440763353,0.229160424011684,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0,0.720599767084807,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0.904980694530854,1.19009341568421,0,0,0.106787412567695,0,2.07119527673598,0,0,0.121792598380896,0,0,0,0,0,0,0,0.732157589411779,0.625954653532499,0,0.221858103073705,0.0620964029413835,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0.192619830407303,0.428883182749851,0,0,0,0.489473409012935,0,0,0,0,0,0.168942440653073,0,0,0,1.10606748921385,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.968853873791107,4.28308260777463,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.40341013740704,0,1.30953347240711,0,0,0,1.56215619722769,0.620060389503552,0,0,0,0,0,0.127762427639595,0,1.3451348888753,0,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.942693539496011,0.840816489941367,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,1.57046773691956,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0.25458863311266,2.42540626749863,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233 | ||
|short_description=p@chr1:27992774..27992780,- | |short_description=p@chr1:27992774..27992780,- | ||
}} | }} |
Latest revision as of 06:51, 28 July 2015
Short description: | p@chr1:27992774..27992780, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27992774..27992780, - |
Coexpression cluster: | C296_gall_small_mesothelioma_acute_bronchioalveolar_epidermoid_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.61e-10 | 1 |
smooth muscle cell of the subclavian artery | 1.79e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.79e-11 | 1 |
cranial nerve | 2.79e-11 | 1 |
nerve trunk | 2.79e-11 | 1 |
nerve connecting eye with brain | 2.79e-11 | 1 |
nerve | 2.79e-11 | 1 |
retinal neural layer | 2.79e-11 | 1 |
presumptive neural retina | 2.79e-11 | 1 |
lower lobe of right lung | 3.41e-11 | 1 |
right lung lobe | 3.41e-11 | 1 |
lower lobe of lung | 3.41e-11 | 1 |
lobe of lung | 3.41e-11 | 1 |
right lung | 3.41e-11 | 1 |
mitral valve | 3.76e-11 | 1 |
chest muscle | 4.15e-11 | 1 |
respiratory system muscle | 4.15e-11 | 1 |
skeletal muscle of trunk | 4.15e-11 | 1 |
respiratory system skeletal muscle | 4.15e-11 | 1 |
thoracic segment muscle | 4.15e-11 | 1 |
chest organ | 4.15e-11 | 1 |
muscle of trunk | 4.15e-11 | 1 |
diaphragm | 4.15e-11 | 1 |
future diaphragm | 4.15e-11 | 1 |
thoracic segment blood vessel | 1.79e-08 | 5 |
subclavian artery | 1.79e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.22e-11 | 1 |
endocrine pancreas cancer | 8.22e-11 | 1 |
pancreatic endocrine carcinoma | 8.22e-11 | 1 |
central nervous system cancer | 1.61e-10 | 1 |
meningioma | 1.61e-10 | 1 |