FFCP PHASE1:Hg19::chr1:25358982..25358992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:25358982..25358992,+ | |||
|coexpression_cluster_id=C2439 | |coexpression_cluster_id=C2439 | ||
|description=CAGE_peak_at_chr1:25358982..25358992,+ | |description=CAGE_peak_at_chr1:25358982..25358992,+ | ||
|id=chr1:25358982..25358992,+ | |id=chr1:25358982..25358992,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.90e-83!42;CL:0000860!7.57e-77!45;CL:0002087!3.50e-57!119;CL:0000738!1.53e-55!140;CL:0002194!3.89e-51!63;CL:0000576!3.89e-51!63;CL:0000040!3.89e-51!63;CL:0000559!3.89e-51!63;CL:0002031!2.28e-49!124;CL:0002009!2.72e-49!65;CL:0000766!7.11e-49!76;CL:0000839!7.82e-48!70;CL:0000557!4.95e-47!71;CL:0000037!1.03e-46!172;CL:0000566!1.03e-46!172;CL:0000988!2.00e-43!182;CL:0002032!2.09e-39!165;CL:0000837!2.09e-39!165;CL:0000763!6.60e-32!112;CL:0000049!6.60e-32!112;CL:0000134!3.59e-18!358;CL:0002320!1.47e-17!365;CL:0000219!2.10e-15!390;CL:0000034!1.61e-14!444;CL:0000048!1.22e-13!430;CL:0000723!2.93e-13!436;CL:0002393!7.05e-12!9;CL:0002397!7.05e-12!9;CL:0000623!4.50e-10!3;CL:0000825!4.50e-10!3;CL:0000842!5.74e-10!3;CL:0000838!1.23e-07!52;CL:0000224!1.44e-07!4;CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53 | |ontology_enrichment_celltype=CL:0002057!4.90e-83!42;CL:0000860!7.57e-77!45;CL:0002087!3.50e-57!119;CL:0000738!1.53e-55!140;CL:0002194!3.89e-51!63;CL:0000576!3.89e-51!63;CL:0000040!3.89e-51!63;CL:0000559!3.89e-51!63;CL:0002031!2.28e-49!124;CL:0002009!2.72e-49!65;CL:0000766!7.11e-49!76;CL:0000839!7.82e-48!70;CL:0000557!4.95e-47!71;CL:0000037!1.03e-46!172;CL:0000566!1.03e-46!172;CL:0000988!2.00e-43!182;CL:0002032!2.09e-39!165;CL:0000837!2.09e-39!165;CL:0000763!6.60e-32!112;CL:0000049!6.60e-32!112;CL:0000134!3.59e-18!358;CL:0002320!1.47e-17!365;CL:0000219!2.10e-15!390;CL:0000034!1.61e-14!444;CL:0000048!1.22e-13!430;CL:0000723!2.93e-13!436;CL:0002393!7.05e-12!9;CL:0002397!7.05e-12!9;CL:0000623!4.50e-10!3;CL:0000825!4.50e-10!3;CL:0000842!5.74e-10!3;CL:0000838!1.23e-07!52;CL:0000224!1.44e-07!4;CL:0000542!1.94e-07!53;CL:0000051!1.94e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.11e-64;33!CL:0002057;8.11e-64;33!CL:0000473;1.61e-48;39!CL:0000234;1.61e-48;39!CL:0000576;2.83e-37;48!CL:0000766;1.61e-18;69!CL:0002087;5.88e-12;104!CL:0000763;1.21e-08;100!CL:0002393;7.30e-07;6!CL:0002397;7.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-67,42;CL:0002057,8.23e-67,42;CL:0000473,3.90e-58,48;CL:0000234,3.90e-58,48;CL:0002194,5.57e-46,59;CL:0000576,5.57e-46,59;CL:0000040,5.57e-46,59;CL:0000559,5.57e-46,59;CL:0002009,2.07e-44,61;CL:0000839,6.75e-41,66;CL:0000557,2.95e-40,67;CL:0000766,2.59e-37,72;CL:0002087,3.57e-28,115;CL:0000763,4.45e-24,108;CL:0000049,4.45e-24,108;CL:0002031,4.51e-24,120;CL:0000738,2.11e-23,136;CL:0000037,2.10e-18,168;CL:0000988,2.55e-17,177;CL:0002032,3.09e-17,161;CL:0000837,3.09e-17,161;CL:0000134,4.31e-07,354;CL:0002320,6.85e-07,361;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-46;42!CL:0000049;3.81e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.38e-43!80;UBERON:0002390!8.76e-43!102;UBERON:0003061!8.76e-43!102;UBERON:0001474!6.02e-42!86;UBERON:0002193!4.66e-40!112;UBERON:0004765!2.85e-34!101;UBERON:0001434!2.85e-34!101;UBERON:0002405!1.15e-30!115;UBERON:0002204!6.88e-17!167;UBERON:0002384!1.00e-16!375;UBERON:0003081!1.46e-16!216 | |ontology_enrichment_uberon=UBERON:0002371!2.38e-43!80;UBERON:0002390!8.76e-43!102;UBERON:0003061!8.76e-43!102;UBERON:0001474!6.02e-42!86;UBERON:0002193!4.66e-40!112;UBERON:0004765!2.85e-34!101;UBERON:0001434!2.85e-34!101;UBERON:0002405!1.15e-30!115;UBERON:0002204!6.88e-17!167;UBERON:0002384!1.00e-16!375;UBERON:0003081!1.46e-16!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.10e-35,76;UBERON:0001474,1.72e-32,82;UBERON:0002390,4.81e-30,98;UBERON:0003061,4.81e-30,98;UBERON:0004765,2.16e-29,90;UBERON:0002405,2.30e-28,93;UBERON:0002193,5.02e-27,108;UBERON:0001434,3.31e-26,100;UBERON:0002204,1.29e-14,167;UBERON:0003081,4.64e-13,203;UBERON:0000926,2.53e-07,315;UBERON:0004120,2.53e-07,315;UBERON:0006603,2.53e-07,315 | |||
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|short_description=p@chr1:25358982..25358992,+ | |short_description=p@chr1:25358982..25358992,+ | ||
}} | }} |
Latest revision as of 06:23, 28 July 2015
Short description: | p@chr1:25358982..25358992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:25358982..25358992, + |
Coexpression cluster: | C2439_CD34_CD14_Basophils_Peripheral_Natural_CD19_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.23e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-67 | 42 |
defensive cell | 3.90e-58 | 48 |
phagocyte | 3.90e-58 | 48 |
monopoietic cell | 5.57e-46 | 59 |
monocyte | 5.57e-46 | 59 |
monoblast | 5.57e-46 | 59 |
promonocyte | 5.57e-46 | 59 |
macrophage dendritic cell progenitor | 2.07e-44 | 61 |
myeloid lineage restricted progenitor cell | 6.75e-41 | 66 |
granulocyte monocyte progenitor cell | 2.95e-40 | 67 |
myeloid leukocyte | 2.59e-37 | 72 |
nongranular leukocyte | 3.57e-28 | 115 |
myeloid cell | 4.45e-24 | 108 |
common myeloid progenitor | 4.45e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 4.51e-24 | 120 |
leukocyte | 2.11e-23 | 136 |
hematopoietic stem cell | 2.10e-18 | 168 |
hematopoietic cell | 2.55e-17 | 177 |
hematopoietic oligopotent progenitor cell | 3.09e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.09e-17 | 161 |
mesenchymal cell | 4.31e-07 | 354 |
connective tissue cell | 6.85e-07 | 361 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.10e-35 | 76 |
bone element | 1.72e-32 | 82 |
hematopoietic system | 4.81e-30 | 98 |
blood island | 4.81e-30 | 98 |
skeletal element | 2.16e-29 | 90 |
immune system | 2.30e-28 | 93 |
hemolymphoid system | 5.02e-27 | 108 |
skeletal system | 3.31e-26 | 100 |
musculoskeletal system | 1.29e-14 | 167 |
lateral plate mesoderm | 4.64e-13 | 203 |
mesoderm | 2.53e-07 | 315 |
mesoderm-derived structure | 2.53e-07 | 315 |
presumptive mesoderm | 2.53e-07 | 315 |