FFCP PHASE1:Hg19::chr1:247089345..247089349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:247089345..247089349,- | |||
|coexpression_cluster_id=C2344 | |||
|description=CAGE_peak_at_chr1:247089345..247089349,- | |description=CAGE_peak_at_chr1:247089345..247089349,- | ||
|id=chr1:247089345..247089349,- | |id=chr1:247089345..247089349,- | ||
|ontology_enrichment_celltype=CL:0000738!1.27e-12!140;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0000988!2.39e-10!182;CL:0002087!2.59e-09!119;CL:0002032!2.80e-09!165;CL:0000837!2.80e-09!165;CL:0002031!2.03e-08!124;CL:0000542!2.28e-08!53;CL:0000051!2.28e-08!53;CL:0000838!2.96e-08!52;CL:0002393!3.12e-07!9;CL:0002397!3.12e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.27e-12!140;CL:0000037!1.34e-10!172;CL:0000566!1.34e-10!172;CL:0000988!2.39e-10!182;CL:0002087!2.59e-09!119;CL:0002032!2.80e-09!165;CL:0000837!2.80e-09!165;CL:0002031!2.03e-08!124;CL:0000542!2.28e-08!53;CL:0000051!2.28e-08!53;CL:0000838!2.96e-08!52;CL:0002393!3.12e-07!9;CL:0002397!3.12e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.29e-20;6!CL:0002397;1.29e-20;6!CL:0000775;4.88e-16;3!CL:0000081;1.08e-15;11!CL:0000623;1.56e-15;3!CL:0000094;2.62e-15;8!CL:0000226;4.24e-15;3!CL:0000842;4.24e-15;3!CL:0000791;1.59e-09;18!CL:0000789;1.59e-09;18!CL:0002419;1.59e-09;18!CL:0000084;7.23e-09;25!CL:0000624;4.48e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.46e-20,136;CL:0002393,3.97e-19,9;CL:0002397,3.97e-19,9;CL:0000775,5.17e-16,3;CL:0000081,8.40e-16,11;CL:0000623,9.38e-16,3;CL:0000825,9.38e-16,3;CL:0000094,2.01e-15,8;CL:0000226,2.06e-15,3;CL:0000842,2.06e-15,3;CL:0000988,2.09e-15,177;CL:0002087,2.23e-15,115;CL:0000037,4.05e-15,168;CL:0002032,5.56e-12,161;CL:0000837,5.56e-12,161;CL:0002031,2.83e-10,120;CL:0000791,1.45e-09,18;CL:0000789,1.45e-09,18;CL:0002420,1.45e-09,18;CL:0002419,1.45e-09,18;CL:0000790,1.45e-09,18;CL:0000838,2.42e-09,52;CL:0000542,3.99e-09,53;CL:0000051,3.99e-09,53;CL:0000084,6.94e-09,25;CL:0000827,6.94e-09,25;CL:0000766,1.42e-08,72;CL:0000624,4.03e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-09;18 | |||
|ontology_enrichment_disease=DOID:0050687!9.70e-11!143;DOID:162!5.13e-10!235;DOID:14566!8.68e-10!239;DOID:305!2.06e-09!106 | |ontology_enrichment_disease=DOID:0050687!9.70e-11!143;DOID:162!5.13e-10!235;DOID:14566!8.68e-10!239;DOID:305!2.06e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.60e-08;15!UBERON:0000179;7.60e-08;15!UBERON:0000463;7.60e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.60e-08,15;UBERON:0000179,6.60e-08,15;UBERON:0000463,6.60e-08,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0,0.314843125254717,0.393364276848904,1.53531759238885,0.77408061658038,0,0,0,0.542270404062111,0.710846162437108,0,3.32397245119126,5.41470008169383,4.99125002646459,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0.502497330513487,0,0,0.605399502633369,0,0,1.05627643155971,1.06302149982522,0.209658645508376,1.79725809834392,0.450530678524519,0.32145117339416,1.71007646244749,0.79566670879636,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0,0.526768169550154,4.13090517239049,4.71612915298998,1.43921049299656,0,0.32592226663359,0.946895611469467,0,0,0.294605907474837,0.221533894583621,0,0.384273959177026,0.260118695119756,0,0,0.289803085735052,0.296573126324121,1.07016331235885,0,0.113309342697566,0,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0.236777252044017,0,2.82249440514625,2.13952156626806,5.35850294366356,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0,0.175669571386252,0.654895377488563,0,0,0,0,0.26591592103773,1.19245312152671,0.571994910780128,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.896681151948218,1.57624608161542,3.23441362289276,3.85029108839245,0.254094624222463,0,0,0,0,3.74503511973591,11.966458368161,2.07207756718018,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0,0,1.44737618286021,3.01999881146064,1.70764092485511,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.659006605437454,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0,0,0.980160863924127,0.185803175125719,0.28853842595289,1.20941133692304,0.159426272728822,0,0.191505370132367,0.211673582723883,0.649243880549111,0,0.684704037099577,0,0,0.169291777801603,0.481764225311099,0,0,0,0.307240764308458,0.671028323677248,0.834245708559542,0,0,0,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0,0.334330152832435,0,0,0,0.307160702099232,0.994147647766298,0.562677665642051,0,0.329607748453519,2.11125408127993,0.796991953004279,0,0,0.306806047506464,0.861593638227486,0,0.269605053441981,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.520855522170466,0.962059999958153,0,0.1137934482855,0,0.945550727071745,0.689486746482929,0,0.347249989866585,0,0.723578631752448,1.52581736317083,0.774054819518572,0.295547618953547,0,0.10893846351899,0,0.307801034015188,0.227884111694002,0,0.448788222048861,0.108647371922008,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,0.75901493089674,0.317873157960757,0.421996129056054,0,0.141353071433941,0.432777279484182,0,0.265372693510018,0.611030144933625,2.6686901581256,0.494255755786011,0.313265848516366,0.202203398942031,0.802577647298789,0,0.91227394607833,0.19566461893209,0.728341138602278,0,1.20990716048664,0.61214552326098,0.63186579628488,0,0,0,0,0,0,0.569219092059585,0.138674673013139,0,0.489961987071888,0.174118413160805,0.17472666824203,0.171986032471617,0.580537987734511,0.292357268344742,0.0821154570532092,0.193978032976839,0.264768380074501,0.225980740780532,0,0,0.189932387867636,0.586654148204409,0.160317640503067,0,0.19980960958213,0.144090417154106,0.343609788497747,1.20116498503375,0,0.248505071130865,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0.273810757783986,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0.315132729228895,0.0824158583811665,0.337017719270924,0.295282444544246,0,0,0.544813624446302,0.643012593860077,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0.670869375198532,0.157611414598396,0,0.105600336519406,0.35857467866569,0.19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|short_description=p@chr1:247089345..247089349,- | |short_description=p@chr1:247089345..247089349,- | ||
}} | }} |
Latest revision as of 06:08, 28 July 2015
Short description: | p@chr1:247089345..247089349, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:247089345..247089349, - |
Coexpression cluster: | C2344_Neutrophils_CD8_CD4_CD14_Natural_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.46e-20 | 136 |
intermediate monocyte | 3.97e-19 | 9 |
CD14-positive, CD16-positive monocyte | 3.97e-19 | 9 |
neutrophil | 5.17e-16 | 3 |
blood cell | 8.40e-16 | 11 |
natural killer cell | 9.38e-16 | 3 |
pro-NK cell | 9.38e-16 | 3 |
granulocyte | 2.01e-15 | 8 |
single nucleate cell | 2.06e-15 | 3 |
mononuclear cell | 2.06e-15 | 3 |
hematopoietic cell | 2.09e-15 | 177 |
nongranular leukocyte | 2.23e-15 | 115 |
hematopoietic stem cell | 4.05e-15 | 168 |
hematopoietic oligopotent progenitor cell | 5.56e-12 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 2.83e-10 | 120 |
mature alpha-beta T cell | 1.45e-09 | 18 |
alpha-beta T cell | 1.45e-09 | 18 |
immature T cell | 1.45e-09 | 18 |
mature T cell | 1.45e-09 | 18 |
immature alpha-beta T cell | 1.45e-09 | 18 |
lymphoid lineage restricted progenitor cell | 2.42e-09 | 52 |
lymphocyte | 3.99e-09 | 53 |
common lymphoid progenitor | 3.99e-09 | 53 |
T cell | 6.94e-09 | 25 |
pro-T cell | 6.94e-09 | 25 |
myeloid leukocyte | 1.42e-08 | 72 |
CD4-positive, alpha-beta T cell | 4.03e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 6.60e-08 | 15 |
haemolymphatic fluid | 6.60e-08 | 15 |
organism substance | 6.60e-08 | 15 |