FFCP PHASE1:Hg19::chr1:246033769..246033788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246033769..246033788,- | |||
|coexpression_cluster_id=C221 | |coexpression_cluster_id=C221 | ||
|description=CAGE_peak_at_chr1:246033769..246033788,- | |description=CAGE_peak_at_chr1:246033769..246033788,- | ||
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|ontology_enrichment_celltype=CL:0000188!3.26e-15!9;CL:0002583!5.61e-13!2;CL:0002334!2.92e-12!12;CL:0002582!4.67e-09!3;CL:0000594!1.50e-08!3;CL:0002570!2.69e-07!8 | |ontology_enrichment_celltype=CL:0000188!3.26e-15!9;CL:0002583!5.61e-13!2;CL:0002334!2.92e-12!12;CL:0002582!4.67e-09!3;CL:0000594!1.50e-08!3;CL:0002570!2.69e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002583;3.24e-12;2!CL:0002570;5.67e-12;8!CL:0000322;8.31e-09;3!CL:0002582;8.96e-09;3!CL:0002334;2.55e-08;12 | |ontology_enrichment_celltype_v019=CL:0002583;3.24e-12;2!CL:0002570;5.67e-12;8!CL:0000322;8.31e-09;3!CL:0002582;8.96e-09;3!CL:0002334;2.55e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002583,2.90e-12,2;CL:0002570,5.83e-12,8;CL:0000322,8.31e-09,3;CL:0002582,8.96e-09,3;CL:0002334,2.46e-08,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050619!3.82e-07!1;DOID:1357!3.82e-07!1;DOID:2394!8.99e-07!14 | |ontology_enrichment_disease=DOID:0050619!3.82e-07!1;DOID:1357!3.82e-07!1;DOID:2394!8.99e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3910;1.48e-12;2!DOID:2394;3.34e-07;14 | |ontology_enrichment_disease_v019=DOID:3910;1.48e-12;2!DOID:2394;3.34e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.48e-12,2;DOID:2394,3.34e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.82e-07!1;UBERON:0001825!3.82e-07!1 | |ontology_enrichment_uberon=UBERON:0001764!3.82e-07!1;UBERON:0001825!3.82e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-12;2!UBERON:0002173;1.48e-12;2!UBERON:0002186;1.48e-12;2!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0001013;3.09e-07;14!UBERON:0009856;6.50e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-12;2!UBERON:0002173;1.48e-12;2!UBERON:0002186;1.48e-12;2!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0001013;3.09e-07;14!UBERON:0009856;6.50e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.48e-12,2;UBERON:0002173,1.48e-12,2;UBERON:0002186,1.48e-12,2;UBERON:0004821,8.31e-09,3;UBERON:0003215,8.31e-09,3;UBERON:0010368,8.31e-09,3;UBERON:0009911,8.31e-09,3;UBERON:0002299,8.31e-09,3;UBERON:0006524,8.31e-09,3;UBERON:0008874,8.31e-09,3;UBERON:0002169,8.31e-09,3;UBERON:0004894,8.31e-09,3;UBERON:0001013,3.14e-07,14 | |||
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|short_description=p@chr1:246033769..246033788,- | |short_description=p@chr1:246033769..246033788,- | ||
}} | }} |
Latest revision as of 06:03, 28 July 2015
Short description: | p@chr1:246033769..246033788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246033769..246033788, - |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 2.90e-12 | 2 |
mesenchymal stem cell of adipose | 5.83e-12 | 8 |
pneumocyte | 8.31e-09 | 3 |
visceral preadipocyte | 8.96e-09 | 3 |
preadipocyte | 2.46e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.48e-12 | 2 |
alveolar duct | 1.48e-12 | 2 |
bronchiole | 1.48e-12 | 2 |
pulmonary alveolus epithelium | 8.31e-09 | 3 |
alveolus | 8.31e-09 | 3 |
pulmonary lobule | 8.31e-09 | 3 |
lobule | 8.31e-09 | 3 |
alveolus of lung | 8.31e-09 | 3 |
alveolar system | 8.31e-09 | 3 |
pulmonary acinus | 8.31e-09 | 3 |
alveolar sac | 8.31e-09 | 3 |
alveolar wall | 8.31e-09 | 3 |
adipose tissue | 3.14e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.48e-12 | 2 |
ovarian cancer | 3.34e-07 | 14 |