FFCP PHASE1:Hg19::chr1:245027971..245027998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:245027971..245027998,+ | |||
|coexpression_cluster_id=C1558 | |||
|description=CAGE_peak_at_chr1:245027971..245027998,+ | |description=CAGE_peak_at_chr1:245027971..245027998,+ | ||
|id=chr1:245027971..245027998,+ | |id=chr1:245027971..245027998,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.78e-29!140;CL:0000037!5.64e-25!172;CL:0000566!5.64e-25!172;CL:0002031!7.12e-25!124;CL:0000988!2.20e-24!182;CL:0002087!1.65e-23!119;CL:0002032!2.33e-23!165;CL:0000837!2.33e-23!165;CL:0000838!3.85e-19!52;CL:0000542!7.17e-19!53;CL:0000051!7.17e-19!53;CL:0000791!7.96e-11!18;CL:0000789!7.96e-11!18;CL:0002420!7.96e-11!18;CL:0002419!7.96e-11!18;CL:0000790!7.96e-11!18;CL:0000766!1.09e-09!76;CL:0000084!1.74e-09!25;CL:0000827!1.74e-09!25;CL:0000945!3.65e-09!24;CL:0000826!3.65e-09!24;CL:0000236!7.19e-09!14;CL:0000625!4.08e-08!11;CL:0000763!5.27e-08!112;CL:0000049!5.27e-08!112;CL:0000557!6.99e-08!71;CL:0000839!8.05e-08!70;CL:0000860!2.87e-07!45;CL:0002057!4.21e-07!42;CL:0002009!8.54e-07!65 | |ontology_enrichment_celltype=CL:0000738!4.78e-29!140;CL:0000037!5.64e-25!172;CL:0000566!5.64e-25!172;CL:0002031!7.12e-25!124;CL:0000988!2.20e-24!182;CL:0002087!1.65e-23!119;CL:0002032!2.33e-23!165;CL:0000837!2.33e-23!165;CL:0000838!3.85e-19!52;CL:0000542!7.17e-19!53;CL:0000051!7.17e-19!53;CL:0000791!7.96e-11!18;CL:0000789!7.96e-11!18;CL:0002420!7.96e-11!18;CL:0002419!7.96e-11!18;CL:0000790!7.96e-11!18;CL:0000766!1.09e-09!76;CL:0000084!1.74e-09!25;CL:0000827!1.74e-09!25;CL:0000945!3.65e-09!24;CL:0000826!3.65e-09!24;CL:0000236!7.19e-09!14;CL:0000625!4.08e-08!11;CL:0000763!5.27e-08!112;CL:0000049!5.27e-08!112;CL:0000557!6.99e-08!71;CL:0000839!8.05e-08!70;CL:0000860!2.87e-07!45;CL:0002057!4.21e-07!42;CL:0002009!8.54e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.22e-27;18!CL:0000789;2.22e-27;18!CL:0002419;2.22e-27;18!CL:0000625;7.49e-19;11!CL:0000084;2.92e-18;25!CL:0000542;2.14e-17;53!CL:0000236;1.19e-16;13!CL:0000624;4.34e-12;6!CL:0000945;2.88e-09;24!CL:0002087;1.21e-08;104!CL:0000094;1.29e-08;8!CL:0002393;4.60e-08;6!CL:0002397;4.60e-08;6!CL:0000898;3.76e-07;3!CL:0000738;4.57e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.13e-37,136;CL:0000838,4.86e-30,52;CL:0002031,1.06e-29,120;CL:0000542,2.82e-29,53;CL:0000051,2.82e-29,53;CL:0000037,9.44e-28,168;CL:0000791,1.16e-27,18;CL:0000789,1.16e-27,18;CL:0002420,1.16e-27,18;CL:0002419,1.16e-27,18;CL:0000790,1.16e-27,18;CL:0002087,2.91e-27,115;CL:0002032,3.17e-27,161;CL:0000837,3.17e-27,161;CL:0000988,2.01e-25,177;CL:0000625,5.46e-19,11;CL:0000084,1.86e-18,25;CL:0000827,1.86e-18,25;CL:0000236,2.09e-15,14;CL:0002393,7.35e-13,9;CL:0002397,7.35e-13,9;CL:0000624,2.96e-12,6;CL:0000766,4.06e-10,72;CL:0000945,2.45e-09,24;CL:0000826,2.45e-09,24;CL:0000134,4.83e-09,354;CL:0000094,1.08e-08,8;CL:0002320,1.56e-08,361;CL:0000219,4.37e-08,386;CL:0000034,2.12e-07,441;CL:0000898,4.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-27;18!CL:0000051;2.14e-17;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.35e-12!102;UBERON:0003061!7.35e-12!102;UBERON:0002193!7.95e-11!112;UBERON:0002371!3.53e-09!80;UBERON:0002405!8.96e-08!115;UBERON:0001474!1.51e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!7.35e-12!102;UBERON:0003061!7.35e-12!102;UBERON:0002193!7.95e-11!112;UBERON:0002371!3.53e-09!80;UBERON:0002405!8.96e-08!115;UBERON:0001474!1.51e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.81e-08,371;UBERON:0002390,5.37e-08,98;UBERON:0003061,5.37e-08,98;UBERON:0002371,4.60e-07,76 | |||
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|short_description=p@chr1:245027971..245027998,+ | |short_description=p@chr1:245027971..245027998,+ | ||
}} | }} |
Latest revision as of 06:00, 28 July 2015
Short description: | p@chr1:245027971..245027998, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:245027971..245027998, + |
Coexpression cluster: | C1558_CD19_CD8_CD4_Mesenchymal_MCF7_CD14CD16_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.13e-37 | 136 |
lymphoid lineage restricted progenitor cell | 4.86e-30 | 52 |
hematopoietic lineage restricted progenitor cell | 1.06e-29 | 120 |
lymphocyte | 2.82e-29 | 53 |
common lymphoid progenitor | 2.82e-29 | 53 |
hematopoietic stem cell | 9.44e-28 | 168 |
mature alpha-beta T cell | 1.16e-27 | 18 |
alpha-beta T cell | 1.16e-27 | 18 |
immature T cell | 1.16e-27 | 18 |
mature T cell | 1.16e-27 | 18 |
immature alpha-beta T cell | 1.16e-27 | 18 |
nongranular leukocyte | 2.91e-27 | 115 |
hematopoietic oligopotent progenitor cell | 3.17e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.17e-27 | 161 |
hematopoietic cell | 2.01e-25 | 177 |
CD8-positive, alpha-beta T cell | 5.46e-19 | 11 |
T cell | 1.86e-18 | 25 |
pro-T cell | 1.86e-18 | 25 |
B cell | 2.09e-15 | 14 |
intermediate monocyte | 7.35e-13 | 9 |
CD14-positive, CD16-positive monocyte | 7.35e-13 | 9 |
CD4-positive, alpha-beta T cell | 2.96e-12 | 6 |
myeloid leukocyte | 4.06e-10 | 72 |
lymphocyte of B lineage | 2.45e-09 | 24 |
pro-B cell | 2.45e-09 | 24 |
mesenchymal cell | 4.83e-09 | 354 |
granulocyte | 1.08e-08 | 8 |
connective tissue cell | 1.56e-08 | 361 |
motile cell | 4.37e-08 | 386 |
stem cell | 2.12e-07 | 441 |
naive T cell | 4.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.81e-08 | 371 |
hematopoietic system | 5.37e-08 | 98 |
blood island | 5.37e-08 | 98 |
bone marrow | 4.60e-07 | 76 |