FFCP PHASE1:Hg19::chr1:24172598..24172603,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:24172598..24172603,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr1:24172598..24172603,- | |description=CAGE_peak_at_chr1:24172598..24172603,- | ||
|id=chr1:24172598..24172603,- | |id=chr1:24172598..24172603,- | ||
|ontology_enrichment_celltype=CL:0002194!3.80e-15!63;CL:0000576!3.80e-15!63;CL:0000040!3.80e-15!63;CL:0000559!3.80e-15!63;CL:0002009!2.45e-14!65;CL:0000839!1.72e-13!70;CL:0000557!3.30e-12!71;CL:0000766!1.03e-10!76;CL:0002057!1.24e-08!42;CL:0000860!2.22e-08!45;CL:0002087!5.40e-08!119;CL:0000763!1.15e-07!112;CL:0000049!1.15e-07!112;CL:0002031!9.33e-07!124 | |ontology_enrichment_celltype=CL:0002194!3.80e-15!63;CL:0000576!3.80e-15!63;CL:0000040!3.80e-15!63;CL:0000559!3.80e-15!63;CL:0002009!2.45e-14!65;CL:0000839!1.72e-13!70;CL:0000557!3.30e-12!71;CL:0000766!1.03e-10!76;CL:0002057!1.24e-08!42;CL:0000860!2.22e-08!45;CL:0002087!5.40e-08!119;CL:0000763!1.15e-07!112;CL:0000049!1.15e-07!112;CL:0002031!9.33e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.52e-44;6!CL:0002619;9.19e-33;3!CL:0000473;2.26e-16;39!CL:0000234;2.26e-16;39!CL:0002379;1.19e-11;1!CL:0000766;1.23e-10;69!CL:0000576;1.39e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.39e-44,6;CL:0002619,9.20e-33,3;CL:0002194,1.07e-23,59;CL:0000576,1.07e-23,59;CL:0000040,1.07e-23,59;CL:0000559,1.07e-23,59;CL:0002009,7.03e-23,61;CL:0000839,4.80e-21,66;CL:0000557,1.04e-20,67;CL:0000766,3.57e-19,72;CL:0000473,1.06e-16,48;CL:0000234,1.06e-16,48;CL:0000763,2.93e-12,108;CL:0000049,2.93e-12,108;CL:0002379,7.76e-12,1;CL:0002087,2.06e-11,115;CL:0002031,7.25e-11,120;CL:0000738,2.19e-09,136;CL:0002032,1.18e-07,161;CL:0000837,1.18e-07,161;CL:0000037,2.92e-07,168;CL:0000988,8.44e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000049;7.11e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.19e-11;1!DOID:3565;1.19e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.76e-12,1;DOID:3565,7.76e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!7.02e-11!86;UBERON:0002371!2.18e-10!80;UBERON:0002405!6.23e-10!115;UBERON:0004765!1.51e-09!101;UBERON:0001434!1.51e-09!101;UBERON:0002390!5.40e-07!102;UBERON:0003061!5.40e-07!102 | |ontology_enrichment_uberon=UBERON:0001474!7.02e-11!86;UBERON:0002371!2.18e-10!80;UBERON:0002405!6.23e-10!115;UBERON:0004765!1.51e-09!101;UBERON:0001434!1.51e-09!101;UBERON:0002390!5.40e-07!102;UBERON:0003061!5.40e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.34e-18,76;UBERON:0001474,1.18e-16,82;UBERON:0004765,4.89e-15,90;UBERON:0002405,1.68e-14,93;UBERON:0002390,1.12e-13,98;UBERON:0003061,1.12e-13,98;UBERON:0001434,2.26e-13,100;UBERON:0002193,2.93e-12,108;UBERON:0002204,1.02e-08,167;UBERON:0003081,8.04e-07,203 | |||
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|short_description=p@chr1:24172598..24172603,- | |short_description=p@chr1:24172598..24172603,- | ||
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Latest revision as of 05:45, 28 July 2015
Short description: | p@chr1:24172598..24172603, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:24172598..24172603, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.39e-44 | 6 |
adult endothelial progenitor cell | 9.20e-33 | 3 |
monopoietic cell | 1.07e-23 | 59 |
monocyte | 1.07e-23 | 59 |
monoblast | 1.07e-23 | 59 |
promonocyte | 1.07e-23 | 59 |
macrophage dendritic cell progenitor | 7.03e-23 | 61 |
myeloid lineage restricted progenitor cell | 4.80e-21 | 66 |
granulocyte monocyte progenitor cell | 1.04e-20 | 67 |
myeloid leukocyte | 3.57e-19 | 72 |
defensive cell | 1.06e-16 | 48 |
phagocyte | 1.06e-16 | 48 |
myeloid cell | 2.93e-12 | 108 |
common myeloid progenitor | 2.93e-12 | 108 |
meningothelial cell | 7.76e-12 | 1 |
nongranular leukocyte | 2.06e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.25e-11 | 120 |
leukocyte | 2.19e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.18e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.18e-07 | 161 |
hematopoietic stem cell | 2.92e-07 | 168 |
hematopoietic cell | 8.44e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.34e-18 | 76 |
bone element | 1.18e-16 | 82 |
skeletal element | 4.89e-15 | 90 |
immune system | 1.68e-14 | 93 |
hematopoietic system | 1.12e-13 | 98 |
blood island | 1.12e-13 | 98 |
skeletal system | 2.26e-13 | 100 |
hemolymphoid system | 2.93e-12 | 108 |
musculoskeletal system | 1.02e-08 | 167 |
lateral plate mesoderm | 8.04e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.76e-12 | 1 |
meningioma | 7.76e-12 | 1 |