FFCP PHASE1:Hg19::chr1:237859854..237859857,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:237859854..237859857,+
|short_description=p@chr1:237859854..237859857,+
|description=CAGE_peak_at_chr1:237859854..237859857,+
|association_with_transcript=...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:237859854..237859857,+ | |||
|description=CAGE_peak_at_chr1:237859854..237859857,+ | |||
|id=chr1:237859854..237859857,+ | |||
|ontology_enrichment_celltype=CL:0000047!7.19e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.55e-33;4!UBERON:0007284;8.55e-33;4!UBERON:0004140;2.06e-15;1!UBERON:0003104;1.22e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.76e-36!41;UBERON:0001890!5.76e-36!41;UBERON:0006240!5.76e-36!41;UBERON:0003080!6.39e-35!42;UBERON:0001017!4.68e-34!82;UBERON:0001049!5.38e-34!57;UBERON:0005068!5.38e-34!57;UBERON:0006241!5.38e-34!57;UBERON:0007135!5.38e-34!57;UBERON:0005743!1.29e-33!86;UBERON:0000073!4.74e-33!94;UBERON:0001016!4.74e-33!94;UBERON:0002020!7.78e-33!34;UBERON:0003528!7.78e-33!34;UBERON:0002616!1.62e-32!59;UBERON:0001893!2.35e-32!34;UBERON:0002791!7.64e-31!33;UBERON:0000955!1.13e-29!69;UBERON:0006238!1.13e-29!69;UBERON:0001869!2.65e-29!32;UBERON:0007023!1.61e-28!115;UBERON:0003075!3.26e-27!86;UBERON:0007284!3.26e-27!86;UBERON:0002346!4.52e-27!90;UBERON:0002619!5.72e-27!22;UBERON:0000956!3.06e-23!25;UBERON:0000203!3.06e-23!25;UBERON:0001950!3.23e-23!20;UBERON:0003056!3.86e-23!61;UBERON:0000924!3.29e-18!173;UBERON:0006601!3.29e-18!173;UBERON:0004121!5.78e-18!169;UBERON:0000033!2.39e-15!123;UBERON:0000153!3.65e-14!129;UBERON:0007811!3.65e-14!129;UBERON:0002308!4.78e-11!9;UBERON:0000125!4.78e-11!9;UBERON:0000200!3.27e-09!6;UBERON:0003978!2.19e-08!3;UBERON:0009751!2.19e-08!3;UBERON:0000946!2.19e-08!3;UBERON:0002523!2.19e-08!3;UBERON:0005983!2.19e-08!3;UBERON:0002165!2.19e-08!3;UBERON:0002062!2.19e-08!3;UBERON:0007280!2.19e-08!3;UBERON:0002420!2.24e-08!9;UBERON:0007245!2.24e-08!9;UBERON:0010009!2.24e-08!9;UBERON:0010011!2.24e-08!9;UBERON:0000454!2.24e-08!9;UBERON:0000025!6.82e-08!194;UBERON:0009663!1.16e-07!7;UBERON:0000349!1.25e-07!5;UBERON:0002021!2.34e-07!5;UBERON:0001872!2.42e-07!5;UBERON:0006331!4.34e-07!3;UBERON:0000988!4.63e-07!3;UBERON:0001871!5.71e-07!7;UBERON:0004111!7.55e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.91e-43;3!UBERON:0000946;1.91e-43;3!UBERON:0002133;1.92e-29;2!UBERON:0002146;7.45e-16;1!UBERON:0002134;7.45e-16;1!UBERON:0005208;7.45e-16;1!UBERON:0005623;7.45e-16;1!UBERON:0004145;7.45e-16;1!UBERON:0005946;7.45e-16;1!UBERON:0005965;7.45e-16;1!UBERON:0002078;7.45e-16;1!UBERON:0003112;2.06e-15;1!UBERON:0002135;2.06e-15;1!UBERON:0011158;2.06e-15;1!UBERON:0003128;2.06e-15;1!UBERON:0001703;2.06e-15;1!UBERON:0002241;2.06e-15;1!UBERON:0010313;1.54e-13;10!UBERON:0000948;1.11e-10;22!UBERON:0007100;1.98e-09;25!UBERON:0002081;1.39e-08;2!UBERON:0002771;2.31e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.24e-43,3;UBERON:0009751,1.24e-43,3;UBERON:0000946,1.24e-43,3;UBERON:0002523,1.24e-43,3;UBERON:0005983,1.24e-43,3;UBERON:0002165,1.24e-43,3;UBERON:0002062,1.24e-43,3;UBERON:0007280,1.24e-43,3;UBERON:0002133,9.31e-30,2;UBERON:0004797,3.86e-19,7;UBERON:0002134,5.56e-16,1;UBERON:0005208,5.56e-16,1;UBERON:0005946,5.56e-16,1;UBERON:0005965,5.56e-16,1;UBERON:0002078,5.56e-16,1;UBERON:0002146,9.99e-16,1;UBERON:0005623,9.99e-16,1;UBERON:0002135,1.34e-15,1;UBERON:0003112,2.75e-15,1;UBERON:0011158,2.75e-15,1;UBERON:0003128,2.75e-15,1;UBERON:0001703,2.75e-15,1;UBERON:0002241,2.75e-15,1;UBERON:0004761,2.75e-15,1;UBERON:0009617,2.75e-15,1;UBERON:0010313,1.35e-13,10;UBERON:0002342,1.35e-13,10;UBERON:0005062,1.35e-13,10;UBERON:0000948,7.31e-10,24;UBERON:0005498,7.31e-10,24;UBERON:0004140,7.31e-10,24;UBERON:0009881,7.31e-10,24;UBERON:0004141,7.31e-10,24;UBERON:0003084,7.31e-10,24;UBERON:0007005,7.31e-10,24;UBERON:0004139,7.31e-10,24;UBERON:0004291,7.31e-10,24;UBERON:0007100,8.58e-09,27;UBERON:0002081,1.20e-08,2;UBERON:0010227,1.20e-08,2;UBERON:0002771,2.48e-08,2;UBERON:0005253,2.67e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.844016498463076,0,1.48323486804084,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0,0.21787692703798,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.95497680890578,2.06244381610515,2.87149209830726,0.599037001496973,0.858452096273142,0.223171457441873,1.5452198671947,0,2.32991899054908,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,2.81367616868034,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0.321146125482298,1.41696576325585,0.798169295285756,0,0.252071696221718,0.138314504928436,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.380494861163441,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0.271878931907327,0.131545547125698,0,0.111231401892069,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.286679166302903,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0.606351566874658,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.844016498463076,0,1.48323486804084,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0,0.21787692703798,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,1.95497680890578,2.06244381610515,2.87149209830726,0.599037001496973,0.858452096273142,0.223171457441873,1.5452198671947,0,2.32991899054908,0,0,0,0,0,0.795229689809303,0.408610218334727,0.160753148465019,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,2.81367616868034,0,0,0,0.169732529954025,0,0,0.558644917973244,0,0.0788617450012534,0,0,0,0.321146125482298,1.41696576325585,0.798169295285756,0,0.252071696221718,0.138314504928436,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.413373593002368,0.380494861163441,1.09394961803644,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.0887023701626388,0,0,0.271878931907327,0.131545547125698,0,0.111231401892069,0,0.942693539496011,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.286679166302903,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0.606351566874658,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr1:237859854..237859857,+ | |||
}} | }} |
Latest revision as of 05:34, 28 July 2015
Short description: | p@chr1:237859854..237859857, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:237859854..237859857, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data