FFCP PHASE1:Hg19::chr1:235465457..235465468,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:235465457..235465468,-
|short_description=p@chr1:235465457..235465468,-
|description=CAGE_peak_at_chr1:235465457..235465468,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:235465457..235465468,- | |||
|coexpression_cluster_id=C1154 | |||
|description=CAGE_peak_at_chr1:235465457..235465468,- | |||
|id=chr1:235465457..235465468,- | |||
|ontology_enrichment_celltype=CL:0000738!8.82e-11!140;CL:0002087!2.19e-10!119;CL:0002031!6.53e-10!124;CL:0000037!2.61e-09!172;CL:0000566!2.61e-09!172;CL:0000988!1.17e-08!182;CL:0002032!3.46e-08!165;CL:0000837!3.46e-08!165;CL:0000542!8.50e-07!53;CL:0000051!8.50e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.58e-14;3!CL:0000791;7.20e-14;18!CL:0000789;7.20e-14;18!CL:0002419;7.20e-14;18!CL:0000624;1.17e-11;6!CL:0000084;1.33e-09;25!CL:0000542;1.38e-07;53!CL:0002393;3.51e-07;6!CL:0002397;3.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.32e-14,3;CL:0000825,4.32e-14,3;CL:0000791,7.12e-14,18;CL:0000789,7.12e-14,18;CL:0002420,7.12e-14,18;CL:0002419,7.12e-14,18;CL:0000790,7.12e-14,18;CL:0000838,8.00e-13,52;CL:0000542,1.61e-12,53;CL:0000051,1.61e-12,53;CL:0002087,3.35e-12,115;CL:0000624,1.02e-11,6;CL:0000738,1.13e-10,136;CL:0000084,1.31e-09,25;CL:0000827,1.31e-09,25;CL:0002031,4.05e-09,120;CL:0000037,1.18e-07,168;CL:0000988,5.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;7.20e-14;18!CL:0000051;1.38e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-12!115;UBERON:0001049!1.15e-07!57;UBERON:0005068!1.15e-07!57;UBERON:0006241!1.15e-07!57;UBERON:0007135!1.15e-07!57;UBERON:0000955!6.34e-07!69;UBERON:0006238!6.34e-07!69;UBERON:0001017!8.46e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr1:235465457..235465468,- | |||
}} | }} |
Latest revision as of 05:19, 28 July 2015
Short description: | p@chr1:235465457..235465468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:235465457..235465468, - |
Coexpression cluster: | C1154_CD14_Natural_CD8_CD4_Neutrophils_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.32e-14 | 3 |
pro-NK cell | 4.32e-14 | 3 |
mature alpha-beta T cell | 7.12e-14 | 18 |
alpha-beta T cell | 7.12e-14 | 18 |
immature T cell | 7.12e-14 | 18 |
mature T cell | 7.12e-14 | 18 |
immature alpha-beta T cell | 7.12e-14 | 18 |
lymphoid lineage restricted progenitor cell | 8.00e-13 | 52 |
lymphocyte | 1.61e-12 | 53 |
common lymphoid progenitor | 1.61e-12 | 53 |
nongranular leukocyte | 3.35e-12 | 115 |
CD4-positive, alpha-beta T cell | 1.02e-11 | 6 |
leukocyte | 1.13e-10 | 136 |
T cell | 1.31e-09 | 25 |
pro-T cell | 1.31e-09 | 25 |
hematopoietic lineage restricted progenitor cell | 4.05e-09 | 120 |
hematopoietic stem cell | 1.18e-07 | 168 |
hematopoietic cell | 5.20e-07 | 177 |