FFCP PHASE1:Hg19::chr1:224927022..224927025,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:224927022..224927025,+ | |||
|description=CAGE_peak_at_chr1:224927022..224927025,+ | |description=CAGE_peak_at_chr1:224927022..224927025,+ | ||
|id=chr1:224927022..224927025,+ | |id=chr1:224927022..224927025,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.31e-16;1!CL:0002379;1.31e-16;1!CL:0002363;5.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,8.86e-17,1;CL:0002591,1.41e-16,1;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.31e-16;1!CL:0000008;5.71e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;1.31e-16;1!DOID:3565;1.31e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,8.86e-17,1;DOID:3565,8.86e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.12e-12!69;UBERON:0006238!1.12e-12!69;UBERON:0000956!3.62e-12!25;UBERON:0000203!3.62e-12!25;UBERON:0000073!1.99e-11!94;UBERON:0001016!1.99e-11!94;UBERON:0002619!3.83e-11!22;UBERON:0001950!4.89e-11!20;UBERON:0002020!5.93e-11!34;UBERON:0003528!5.93e-11!34;UBERON:0001893!7.01e-11!34;UBERON:0001869!9.79e-11!32;UBERON:0002791!3.50e-10!33;UBERON:0001017!3.64e-10!82;UBERON:0005743!5.91e-10!86;UBERON:0002616!5.65e-09!59;UBERON:0000033!2.27e-08!123;UBERON:0002780!3.70e-08!41;UBERON:0001890!3.70e-08!41;UBERON:0006240!3.70e-08!41;UBERON:0003080!7.56e-08!42;UBERON:0001049!9.72e-08!57;UBERON:0005068!9.72e-08!57;UBERON:0006241!9.72e-08!57;UBERON:0007135!9.72e-08!57;UBERON:0000153!1.64e-07!129;UBERON:0007811!1.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.31e-16;1!UBERON:0001785;1.31e-16;1!UBERON:0002464;1.31e-16;1!UBERON:0004904;1.31e-16;1!UBERON:0001021;1.31e-16;1!UBERON:0002118;3.43e-13;5!UBERON:0003714;5.71e-09;2!UBERON:0005162;5.71e-09;2!UBERON:0000122;5.71e-09;2!UBERON:0003566;5.71e-09;2!UBERON:0000078;5.71e-09;2!UBERON:0001777;5.71e-09;2!UBERON:0002012;5.71e-09;2!UBERON:0008886;5.71e-09;2!UBERON:0000010;9.84e-08;8!UBERON:0010313;4.80e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.57e-17,1;UBERON:0001785,7.57e-17,1;UBERON:0002464,7.57e-17,1;UBERON:0004904,7.57e-17,1;UBERON:0001021,7.57e-17,1;UBERON:0003902,7.57e-17,1;UBERON:0005425,7.57e-17,1;UBERON:0002118,3.03e-13,5;UBERON:0003714,4.34e-09,2;UBERON:0005162,4.34e-09,2;UBERON:0000122,4.34e-09,2;UBERON:0000078,5.94e-09,2;UBERON:0007497,5.94e-09,2;UBERON:0003643,5.94e-09,2;UBERON:0003504,5.94e-09,2;UBERON:0003469,5.94e-09,2;UBERON:0003496,5.94e-09,2;UBERON:0002012,5.94e-09,2;UBERON:0008886,5.94e-09,2;UBERON:0007303,5.94e-09,2;UBERON:0002061,5.94e-09,2;UBERON:0005432,5.94e-09,2;UBERON:0004363,5.94e-09,2;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0000010,9.52e-08,8;UBERON:0010313,5.59e-07,10;UBERON:0002342,5.59e-07,10;UBERON:0005062,5.59e-07,10 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0447784237956,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0.469737994575059,0.485618833104395,0.421352420106746,0.204154171254893,0.245668634623536,0,0,0,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,1.0126579934476,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.936017060556951,0.297262324577456,0,0,0,0,0,0,0,0,0,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.308419387605311,0,0.328508624055237,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0.62962469366128,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0.281338832821026,0.333926115068718,0,0,0,0,0,1.1249555075237,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0,0.067401132980677,0,0,0,0,0.971121518136371,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0.857974989309823,0.14405479798815,0,0,0.135904206073614,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.249960815924213,0,0,1.41159491818903,0,0,0.149254802886874,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0.295710299979268,0,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0.107410557042488,1.39210127963548,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.615349092722265,0.504143392443436,0,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0,0.0634158101939068,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0.9555033757741,0.0714765441766563,0,0.813689977576877,0,0,0,0,0,0,0.473328002922261,1.10777426186905,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.754814217833368,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr1:224927022..224927025,+ | |short_description=p@chr1:224927022..224927025,+ | ||
}} | }} |
Latest revision as of 04:27, 28 July 2015
Short description: | p@chr1:224927022..224927025, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:224927022..224927025, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 8.86e-17 | 1 |
smooth muscle cell of the pulmonary artery | 1.41e-16 | 1 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.57e-17 | 1 |
cranial nerve | 7.57e-17 | 1 |
nerve trunk | 7.57e-17 | 1 |
nerve connecting eye with brain | 7.57e-17 | 1 |
nerve | 7.57e-17 | 1 |
retinal neural layer | 7.57e-17 | 1 |
presumptive neural retina | 7.57e-17 | 1 |
right ovary | 3.03e-13 | 5 |
neural tissue | 4.34e-09 | 2 |
multi cell component structure | 4.34e-09 | 2 |
neuron projection bundle | 4.34e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 5.94e-09 | 2 |
developing epithelial placode | 5.94e-09 | 2 |
respiratory system arterial blood vessel | 5.94e-09 | 2 |
respiratory system blood vessel | 5.94e-09 | 2 |
respiratory system artery | 5.94e-09 | 2 |
head blood vessel | 5.94e-09 | 2 |
pulmonary artery | 5.94e-09 | 2 |
pulmonary vascular system | 5.94e-09 | 2 |
pharyngeal vasculature | 5.94e-09 | 2 |
truncus arteriosus | 5.94e-09 | 2 |
aortic sac | 5.94e-09 | 2 |
pharyngeal arch artery | 5.94e-09 | 2 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
peripheral nervous system | 9.52e-08 | 8 |
neural crest-derived structure | 5.59e-07 | 10 |
neural crest | 5.59e-07 | 10 |
neural fold | 5.59e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 8.86e-17 | 1 |
meningioma | 8.86e-17 | 1 |