FFCP PHASE1:Hg19::chr1:218521634..218521641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:218521634..218521641,+ | |||
|description=CAGE_peak_at_chr1:218521634..218521641,+ | |description=CAGE_peak_at_chr1:218521634..218521641,+ | ||
|id=chr1:218521634..218521641,+ | |id=chr1:218521634..218521641,+ | ||
|ontology_enrichment_celltype=CL:0000359!7.21e-17!32;CL:0000183!1.37e-16!59;CL:0000192!3.27e-15!42;CL:0000514!3.27e-15!42;CL:0000187!9.05e-15!54;CL:0000680!1.33e-14!57;CL:0000056!1.33e-14!57;CL:0000355!1.33e-14!57;CL:0000393!2.65e-14!60;CL:0000211!2.65e-14!60;CL:0000055!8.05e-14!180;CL:0000222!6.14e-13!119;CL:0000220!1.13e-12!246;CL:0002321!3.19e-12!248 | |ontology_enrichment_celltype=CL:0000359!7.21e-17!32;CL:0000183!1.37e-16!59;CL:0000192!3.27e-15!42;CL:0000514!3.27e-15!42;CL:0000187!9.05e-15!54;CL:0000680!1.33e-14!57;CL:0000056!1.33e-14!57;CL:0000355!1.33e-14!57;CL:0000393!2.65e-14!60;CL:0000211!2.65e-14!60;CL:0000055!8.05e-14!180;CL:0000222!6.14e-13!119;CL:0000220!1.13e-12!246;CL:0002321!3.19e-12!248 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.72e-21;32!CL:0000192;6.72e-13;43!CL:0000187;3.41e-07;55!CL:0000393;4.86e-07;61!CL:0000211;4.86e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.34e-22,32;CL:0000192,1.11e-16,43;CL:0000514,1.11e-16,43;CL:0000187,2.65e-14,55;CL:0000222,1.40e-13,121;CL:0000680,4.49e-13,58;CL:0000056,4.49e-13,58;CL:0000355,4.49e-13,58;CL:0000393,6.47e-13,61;CL:0000211,6.47e-13,61;CL:0002321,2.48e-10,250 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-13;43!CL:0000355;7.01e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002049;2.25e-10;75!UBERON:0007798;2.25e-10;75!UBERON:0004573;7.43e-10;33!UBERON:0004571;7.43e-10;33!UBERON:0001637;7.64e-10;42!UBERON:0003509;7.64e-10;42!UBERON:0004572;7.64e-10;42!UBERON:0006876;1.61e-09;11!UBERON:0007625;5.69e-09;11!UBERON:0000055;1.58e-08;65!UBERON:0007500;3.61e-07;56!UBERON:0001981;3.61e-07;56!UBERON:0004537;3.61e-07;56!UBERON:0010371;4.82e-07;31!UBERON:0003914;5.55e-07;74 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,1.82829939739887,3.19454117451962,19.538432703228,0.436882744260345,0.527533956456907,0.37129905888014,0.331397375727916,2.01697543935533,0.602694528023977,2.92124036154949,0.975865597581014,4.55547914884115,4.28401451612931,1.88072832886853,2.28988789704845,1.50561867580173,5.64941878176613,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.767175371061182,2.1686349143074,2.50668955317945,0.144846518960824,7.95285947051099,0.486634870302636,5.38848457835187,3.76939975686359,3.42555664203192,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.835979866147242,0,0,2.34304428935269,0.805658634218294,7.60272105718513,0.24406205754817,0,0.81014194788176,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0,1.77282716330412,33.7643411073708,5.16305917347865,0.354668382198357,5.60677600142307,28.8222288470203,5.67335361359468,0.311211035399766,0.808264032418128,0.163461903113459,8.32465852047123,0.576175924479999,0,0,0,0,0,0,0.140450806702248,1.22492502752936,0,1.23990937410919,2.37600571456411,0.741800787835671,1.82032272387605,3.59309070908119,0,0.250237039743928,0.831192346452549,2.63386572528503,1.22595118319608,0.150238058906597,0.680593098960126,1.97328599257748,0.640672166455702,0,0,0.103052529238439,0.515281080091258,0,0,0,0,0,0.323292113637624,0.355009592516614,0.201504196455281,0,0.386521706326594,1.36373060295417,0.286804595389004,0,0,0.116193942869518,0,0,0,10.9514672630871,2.57296375277154,6.90674606762403,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,5.60967095213783,2.057870056657,1.47008711385542,0,0,0,0,0.491953754172454,2.74508496477641,0.98775256867763,3.37205259772859,0,0,0.325808305310325,0,2.88662684050547,2.31860809950154,9.04046945615827,2.7429625074604,1.85194205030644,4.94660795809955,0.790204397959275,0.858486162094873,0,0,0,0,2.51973192298289,0.141775097242386,0.0895585227028483,0.290633938513962,4.60059214998253,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,3.7003257833969,3.05172048183296,1.10007428731425,0.129271715757778,0,0,0.797814349754612,1.04007436911366,3.08648849114571,5.67396528093113,1.0656887160644,0.285955987316295,1.08524321078289,3.29296134712308,0,0.355391948742546,0.791951872933429,0.904318131178758,0,0,0,0,0,6.9491208092559,2.29723871668228,0,0.723906533337896,0,0.716243852959582,0,0,0,0,0.76228387266739,0,1.54657762555539,0,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,2.9115920614313,0.892144943985809,2.68094105557689,0.585707074963566,2.70851489754947,0,1.03473071292505,3.32112799267718,0,0,16.6430983843329,5.14715135716284,0,0,0.106727557803444,0.909382714338778,0,0.30239029332968,0,0.460385919864187,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0.604297247958111,0.802025881213139,0.276242966807689,2.18147451512753,0.364182336013434,0.393373244878272,0.902399225814824,0.15403067420883,3.13739907670742,1.46139224653261,0.527758144464379,2.27466768141793,0,0.863663664408557,4.62681758070868,3.79325012561394,3.51182841698397,0.254876273045038,0,2.68649705666614,0,0,0.512900250232778,4.92021968549559,1.62689197332152,0.515205058238611,2.19766715564024,1.15513299888823,0.574265537996172,1.95018073810956,1.6068392984416,2.12675580242668,0.616194468458578,0.307007349452259,0.275673144969061,0,0.145016693914229,0.255679882248303,2.40386496246191,0,0.384380134730212,0.510450849978337,0.10115778085555,0,5.98143458978216,1.3940745403212,10.1651081458109,4.25844824253617,0.869932992075073,1.8532421910392,4.8662461492277,2.97726695487734,9.17500331684305,2.66882271493355,0.767693373934002,0,4.45484547096312,3.13979456079692,1.07923474549989,0.54907405947211,1.41374882814824,3.43710218674637,3.17020642346017,0.842516912477962,0.48763373908959,1.70599442741899,3.16950440270266,0.136499911407986,0.424216295861138,1.13008116620243,6.06501877900737,1.32687795048244,3.94605796728386,0,0,4.66693867014219,1.239293992399,5.63391205064483,0.430234056612155,2.16147890228867,3.92338156629375,0,0.211107635297664,0,0.379473173765715,4.54915136318478,0.769776901804097,0,0,0.282431402330337,1.72202149068492,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,8.01804638248124,0,0,0.422008249231538,0.667852230137435,0,0,0.996239941255349,0.552567831062295,0,0.102268682502155,0,1.24415835064723,1.3480252672099,0,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0.437299999980979,0.724999575434793,0,0.762760950878299,0,0,0,0,0,0,0,0.774054819518572,0.591095237907095,1.09692698576986,0,0,0.538651809526579,1.93701494939902,0,0,0,0.31900115973192,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.44228782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| ||
|short_description=p@chr1:218521634..218521641,+ | |short_description=p@chr1:218521634..218521641,+ | ||
}} | }} |
Latest revision as of 03:58, 28 July 2015
Short description: | p@chr1:218521634..218521641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:218521634..218521641, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.34e-22 | 32 |
smooth muscle cell | 1.11e-16 | 43 |
smooth muscle myoblast | 1.11e-16 | 43 |
muscle cell | 2.65e-14 | 55 |
mesodermal cell | 1.40e-13 | 121 |
muscle precursor cell | 4.49e-13 | 58 |
myoblast | 4.49e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.49e-13 | 58 |
electrically responsive cell | 6.47e-13 | 61 |
electrically active cell | 6.47e-13 | 61 |
embryonic cell | 2.48e-10 | 250 |