FFCP PHASE1:Hg19::chr1:214649788..214649799,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:214649788..214649799,- | |||
|description=CAGE_peak_at_chr1:214649788..214649799,- | |description=CAGE_peak_at_chr1:214649788..214649799,- | ||
|id=chr1:214649788..214649799,- | |id=chr1:214649788..214649799,- | ||
|ontology_enrichment_celltype=CL:0002144!1.11e-10!3;CL:0000239!1.15e-10!3;CL:1000615!1.15e-10!3;CL:0002306!1.15e-10!3;CL:0002621!2.24e-10!3;CL:0000066!2.27e-09!254;CL:0002076!4.17e-08!43;CL:0000223!2.08e-07!59 | |ontology_enrichment_celltype=CL:0002144!1.11e-10!3;CL:0000239!1.15e-10!3;CL:1000615!1.15e-10!3;CL:0002306!1.15e-10!3;CL:0002621!2.24e-10!3;CL:0000066!2.27e-09!254;CL:0002076!4.17e-08!43;CL:0000223!2.08e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.81e-40;1!CL:0000159;5.15e-21;2!CL:0000945;1.31e-07;24 | |ontology_enrichment_celltype_v019=CL:0000313;1.81e-40;1!CL:0000159;5.15e-21;2!CL:0000945;1.31e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.30e-40,1;CL:0000159,6.96e-21,2;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;1.81e-40;1!DOID:4468;3.11e-21;2!DOID:299;2.24e-07;25!DOID:120;6.72e-07;27 | |ontology_enrichment_disease_v019=DOID:2152;1.81e-40;1!DOID:4468;3.11e-21;2!DOID:299;2.24e-07;25!DOID:120;6.72e-07;27 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,3.30e-40,1;DOID:4468,3.11e-21,2;DOID:299,2.35e-07,25;DOID:120,7.03e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001915!1.11e-10!3;UBERON:0001982!1.11e-10!3;UBERON:0006853!1.15e-10!3;UBERON:0007685!1.15e-10!3;UBERON:0004134!1.15e-10!3;UBERON:0001949!2.24e-10!3 | |ontology_enrichment_uberon=UBERON:0001915!1.11e-10!3;UBERON:0001982!1.11e-10!3;UBERON:0006853!1.15e-10!3;UBERON:0007685!1.15e-10!3;UBERON:0004134!1.15e-10!3;UBERON:0001949!2.24e-10!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.81e-40;1!UBERON:0004909;5.15e-21;2 | |ontology_enrichment_uberon_v019=UBERON:0004911;1.81e-40;1!UBERON:0004909;5.15e-21;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.30e-40,1;UBERON:0004909,6.96e-21,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.23150884174919,1.25937250101887,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0.22452937262617,0.563057402416611,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58696709697646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.28120759293973,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,1.11855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.23150884174919,1.25937250101887,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0.22452937262617,0.563057402416611,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.576570202095319,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58696709697646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.28120759293973,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0,0,0,0,1.11855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr1:214649788..214649799,- | |short_description=p@chr1:214649788..214649799,- | ||
}} | }} |
Latest revision as of 03:45, 28 July 2015
Short description: | p@chr1:214649788..214649799, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:214649788..214649799, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.30e-40 | 1 |
seromucus secreting cell | 6.96e-21 | 2 |
lymphocyte of B lineage | 1.31e-07 | 24 |
pro-B cell | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.30e-40 | 1 |
epithelium of gonad | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.30e-40 | 1 |
clear cell adenocarcinoma | 3.11e-21 | 2 |
adenocarcinoma | 2.35e-07 | 25 |
female reproductive organ cancer | 7.03e-07 | 27 |