FFCP PHASE1:Hg19::chr1:21339584..21339601,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:21339584..21339601,- | |||
|description=CAGE_peak_at_chr1:21339584..21339601,- | |||
|id=chr1:21339584..21339601,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002549;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,7.52e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;8.31e-12;5!UBERON:0007297;7.27e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.17e-15;1!DOID:10165;8.17e-15;1!DOID:1798;8.17e-15;1!DOID:3193;4.68e-08;2!DOID:962;4.68e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.13e-15,1;DOID:10165,7.13e-15,1;DOID:1798,7.13e-15,1;DOID:3193,4.69e-08,2;DOID:962,4.69e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000341!2.38e-07!2;UBERON:0002200!5.71e-07!11;UBERON:0006876!5.71e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.97e-14;1!UBERON:0002046;8.31e-12;5!UBERON:0000341;4.68e-08;2!UBERON:0003714;4.68e-08;2!UBERON:0005629;7.27e-08;2!UBERON:0005358;7.27e-08;2!UBERON:0001886;7.27e-08;2!UBERON:0004086;7.27e-08;2!UBERON:0005282;7.27e-08;2!UBERON:0005281;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.23e-14,1;UBERON:0002046,8.78e-12,5;UBERON:0004117,8.78e-12,5;UBERON:0007689,8.78e-12,5;UBERON:0007123,8.78e-12,5;UBERON:0003091,8.78e-12,5;UBERON:0000341,4.09e-08,2;UBERON:0003714,4.69e-08,2;UBERON:0005629,7.52e-08,2;UBERON:0005358,7.52e-08,2;UBERON:0001886,7.52e-08,2;UBERON:0004086,7.52e-08,2;UBERON:0005282,7.52e-08,2;UBERON:0005281,7.52e-08,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.61221999997337,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,1.13843818411917,0,0.173559738335131,0,0,1.7472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41850273138557,1.41627387964495,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,6.17602894321944,0,0,0,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01839517972415,0,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3571602503328,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,2.09234565662625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,2.85677317756488,0.0645889098360061,0.0620747142958579,0.224263725161227,2.10035622317944,4.44657815708082,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:21339584..21339601,- | |||
}} |
Latest revision as of 03:43, 28 July 2015
Short description: | p@chr1:21339584..21339601, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:21339584..21339601, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.23e-14 | 1 |
thyroid gland | 8.78e-12 | 5 |
pharyngeal pouch | 8.78e-12 | 5 |
thyroid diverticulum | 8.78e-12 | 5 |
pharyngeal pouch 2 | 8.78e-12 | 5 |
thyroid primordium | 8.78e-12 | 5 |
throat | 4.09e-08 | 2 |
neural tissue | 4.69e-08 | 2 |
vascular plexus | 7.52e-08 | 2 |
ventricle of nervous system | 7.52e-08 | 2 |
choroid plexus | 7.52e-08 | 2 |
brain ventricle | 7.52e-08 | 2 |
ventricular system of brain | 7.52e-08 | 2 |
ventricular system of central nervous system | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.13e-15 | 1 |
endocrine pancreas cancer | 7.13e-15 | 1 |
pancreatic endocrine carcinoma | 7.13e-15 | 1 |
peripheral nerve sheath neoplasm | 4.69e-08 | 2 |
neurofibroma | 4.69e-08 | 2 |