FFCP PHASE1:Hg19::chr1:209827500..209827512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:209827500..209827512,- | |||
|coexpression_cluster_id=C1021 | |||
|description=CAGE_peak_at_chr1:209827500..209827512,- | |description=CAGE_peak_at_chr1:209827500..209827512,- | ||
|id=chr1:209827500..209827512,- | |id=chr1:209827500..209827512,- | ||
|ontology_enrichment_celltype=CL:0002368!1.70e-47!13;CL:0002076!3.92e-44!43;CL:0002159!3.22e-31!13;CL:0000223!6.16e-31!59;CL:0002202!2.66e-28!9;CL:0002632!2.66e-28!9;CL:0000066!2.99e-21!254;CL:0002328!2.76e-17!3;CL:0002621!6.87e-17!3;CL:0000068!1.23e-16!3;CL:0000069!1.23e-16!3;CL:0000307!1.23e-16!3;CL:0000377!1.23e-16!3;CL:0002166!1.87e-16!3;CL:0000240!2.67e-14!6;CL:0000311!2.67e-14!6;CL:0000079!2.67e-14!6;CL:0000237!2.67e-14!6;CL:0000036!2.67e-14!6;CL:0000357!2.67e-14!6;CL:0000114!2.67e-14!6;CL:0000244!2.03e-12!4;CL:0000731!2.03e-12!4;CL:0000220!1.33e-11!246;CL:0002321!1.85e-11!248;CL:0002077!2.33e-11!33;CL:0002251!4.31e-11!21;CL:0000575!4.49e-11!2;CL:0000362!6.09e-11!8;CL:0000312!2.21e-10!5;CL:0000076!2.33e-09!62;CL:0002231!7.91e-08!3 | |ontology_enrichment_celltype=CL:0002368!1.70e-47!13;CL:0002076!3.92e-44!43;CL:0002159!3.22e-31!13;CL:0000223!6.16e-31!59;CL:0002202!2.66e-28!9;CL:0002632!2.66e-28!9;CL:0000066!2.99e-21!254;CL:0002328!2.76e-17!3;CL:0002621!6.87e-17!3;CL:0000068!1.23e-16!3;CL:0000069!1.23e-16!3;CL:0000307!1.23e-16!3;CL:0000377!1.23e-16!3;CL:0002166!1.87e-16!3;CL:0000240!2.67e-14!6;CL:0000311!2.67e-14!6;CL:0000079!2.67e-14!6;CL:0000237!2.67e-14!6;CL:0000036!2.67e-14!6;CL:0000357!2.67e-14!6;CL:0000114!2.67e-14!6;CL:0000244!2.03e-12!4;CL:0000731!2.03e-12!4;CL:0000220!1.33e-11!246;CL:0002321!1.85e-11!248;CL:0002077!2.33e-11!33;CL:0002251!4.31e-11!21;CL:0000575!4.49e-11!2;CL:0000362!6.09e-11!8;CL:0000312!2.21e-10!5;CL:0000076!2.33e-09!62;CL:0002231!7.91e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.89e-53;13!CL:0002202;1.18e-34;9!CL:0002632;1.18e-34;9!CL:0002076;2.93e-30;42!CL:0002328;1.75e-27;3!CL:0002621;7.88e-27;3!CL:0000307;1.89e-26;3!CL:0002159;6.92e-22;14!CL:0000312;1.79e-16;5!CL:0000362;1.03e-15;9!CL:0000240;7.97e-14;6!CL:0000311;7.97e-14;6!CL:0000079;7.97e-14;6!CL:0000237;7.97e-14;6!CL:0002166;1.59e-12;3!CL:0002252;9.81e-10;1!CL:0000244;1.28e-09;4!CL:0000731;1.28e-09;4!CL:0002077;4.88e-08;34!CL:0002251;3.96e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.45e-53,13;CL:0002076,2.90e-38,42;CL:0002202,1.12e-34,9;CL:0002632,1.12e-34,9;CL:0002328,1.60e-27,3;CL:0000223,4.48e-27,58;CL:0002621,7.22e-27,3;CL:0000068,1.90e-26,3;CL:0000069,1.90e-26,3;CL:0000307,1.90e-26,3;CL:0000377,1.90e-26,3;CL:0002159,7.18e-22,14;CL:0000312,1.79e-16,5;CL:0000362,1.07e-15,9;CL:0000066,6.89e-15,253;CL:0000240,7.98e-14,6;CL:0000311,7.98e-14,6;CL:0000079,7.98e-14,6;CL:0000237,7.98e-14,6;CL:0000036,7.98e-14,6;CL:0000357,7.98e-14,6;CL:0000114,7.98e-14,6;CL:0002166,1.59e-12,3;CL:0002321,1.28e-10,250;CL:0002252,8.24e-10,1;CL:0000244,1.39e-09,4;CL:0000731,1.39e-09,4;CL:0002077,9.39e-09,34;CL:0002251,3.77e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000377;1.89e-26;3!CL:0000223;1.83e-15;58!CL:0000357;7.97e-14;6!CL:0000114;7.97e-14;6 | |||
|ontology_enrichment_disease=DOID:1749!1.29e-08!14 | |ontology_enrichment_disease=DOID:1749!1.29e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007196!7.16e-18!14;UBERON:0001558!7.16e-18!14;UBERON:0004815!2.76e-17!3;UBERON:0002031!2.76e-17!3;UBERON:0001949!6.87e-17!3;UBERON:0001004!3.44e-15!72;UBERON:0002185!4.35e-13!4;UBERON:0001708!1.80e-12!4;UBERON:0001704!1.80e-12!4;UBERON:0000065!6.50e-12!53;UBERON:0004119!3.74e-11!169;UBERON:0000925!3.74e-11!169;UBERON:0006595!3.74e-11!169;UBERON:0000365!4.96e-10!5;UBERON:0003729!2.94e-09!5;UBERON:0005178!8.24e-09!34;UBERON:0002224!8.24e-09!34;UBERON:0005181!1.60e-08!35;UBERON:0004807!1.60e-08!28;UBERON:0002090!1.82e-08!6;UBERON:0005910!1.97e-08!6;UBERON:0005157!2.29e-08!51;UBERON:0005153!7.28e-08!37;UBERON:0003102!1.05e-07!95;UBERON:0003126!2.17e-07!7;UBERON:0001005!2.17e-07!7;UBERON:0005911!6.89e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.75e-27;3!UBERON:0002031;1.75e-27;3!UBERON:0001949;7.88e-27;3!UBERON:0007196;1.17e-20;15!UBERON:0001558;1.17e-20;15!UBERON:0000486;4.84e-18;12!UBERON:0002185;9.52e-17;5!UBERON:0004807;4.69e-14;22!UBERON:0010371;3.64e-13;31!UBERON:0005911;4.62e-13;36!UBERON:0000485;4.01e-12;7!UBERON:0005178;7.54e-12;34!UBERON:0002224;7.54e-12;34!UBERON:0003929;7.56e-12;7!UBERON:0003126;1.09e-11;7!UBERON:0001005;1.09e-11;7!UBERON:0000065;1.27e-11;44!UBERON:0005181;8.60e-11;35!UBERON:0003350;1.96e-10;8!UBERON:0001828;1.96e-10;8!UBERON:0001708;1.28e-09;4!UBERON:0008895;1.28e-09;4!UBERON:0001003;1.66e-09;15!UBERON:0007376;1.66e-09;15!UBERON:0011159;7.25e-08;5!UBERON:0000365;7.25e-08;5!UBERON:0000072;9.12e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.60e-27,3;UBERON:0002031,1.60e-27,3;UBERON:0001949,7.22e-27,3;UBERON:0007196,1.13e-20,15;UBERON:0001558,1.13e-20,15;UBERON:0002185,9.03e-17,5;UBERON:0001004,4.78e-15,74;UBERON:0000065,7.15e-12,54;UBERON:0005178,7.22e-12,34;UBERON:0002224,7.22e-12,34;UBERON:0003126,1.09e-11,7;UBERON:0001005,1.09e-11,7;UBERON:0005181,1.65e-11,35;UBERON:0004119,4.06e-11,160;UBERON:0000925,4.06e-11,160;UBERON:0006595,4.06e-11,160;UBERON:0004807,5.83e-11,28;UBERON:0003350,1.90e-10,8;UBERON:0001828,1.90e-10,8;UBERON:0001708,1.28e-09,4;UBERON:0008895,1.28e-09,4;UBERON:0000485,1.49e-09,9;UBERON:0001003,1.70e-09,15;UBERON:0007376,1.70e-09,15;UBERON:0007383,1.70e-09,15;UBERON:0008947,6.90e-08,38;UBERON:0003258,6.90e-08,38;UBERON:0011159,7.25e-08,5;UBERON:0000365,7.77e-08,5;UBERON:0000915,1.70e-07,52;UBERON:0005911,2.22e-07,82;UBERON:0003102,3.04e-07,99 | |||
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|short_description=p@chr1:209827500..209827512,- | |short_description=p@chr1:209827500..209827512,- | ||
}} | }} |
Latest revision as of 03:22, 28 July 2015
Short description: | p@chr1:209827500..209827512, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209827500..209827512, - |
Coexpression cluster: | C1021_Small_Bronchial_Tracheal_Mallassezderived_Gingival_Sebocyte_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.60e-27 | 3 |
epithelium of bronchus | 1.60e-27 | 3 |
gingival epithelium | 7.22e-27 | 3 |
tracheobronchial tree | 1.13e-20 | 15 |
lower respiratory tract | 1.13e-20 | 15 |
bronchus | 9.03e-17 | 5 |
respiratory system | 4.78e-15 | 74 |
respiratory tract | 7.15e-12 | 54 |
thoracic cavity element | 7.22e-12 | 34 |
thoracic cavity | 7.22e-12 | 34 |
trachea | 1.09e-11 | 7 |
respiratory airway | 1.09e-11 | 7 |
thoracic segment organ | 1.65e-11 | 35 |
endoderm-derived structure | 4.06e-11 | 160 |
endoderm | 4.06e-11 | 160 |
presumptive endoderm | 4.06e-11 | 160 |
respiratory system epithelium | 5.83e-11 | 28 |
epithelium of mucosa | 1.90e-10 | 8 |
gingiva | 1.90e-10 | 8 |
jaw skeleton | 1.28e-09 | 4 |
splanchnocranium | 1.28e-09 | 4 |
simple columnar epithelium | 1.49e-09 | 9 |
skin epidermis | 1.70e-09 | 15 |
outer epithelium | 1.70e-09 | 15 |
enveloping layer of ectoderm | 1.70e-09 | 15 |
respiratory primordium | 6.90e-08 | 38 |
endoderm of foregut | 6.90e-08 | 38 |
primary subdivision of cranial skeletal system | 7.25e-08 | 5 |
urothelium | 7.77e-08 | 5 |
thoracic segment of trunk | 1.70e-07 | 52 |
endo-epithelium | 2.22e-07 | 82 |
surface structure | 3.04e-07 | 99 |